DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pxt and Mpo

DIOPT Version :9

Sequence 1:NP_650648.3 Gene:Pxt / 42131 FlyBaseID:FBgn0261987 Length:809 Species:Drosophila melanogaster
Sequence 2:XP_006247157.1 Gene:Mpo / 303413 RGDID:1592081 Length:718 Species:Rattus norvegicus


Alignment Length:629 Identity:206/629 - (32%)
Similarity:313/629 - (49%) Gaps:101/629 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   227 PPVCGNIRSVYRSMDGTCNNPEPQRS-LWGAAGQPMERMLPPAYEDGI-----WTPRAHSSD-GT 284
            ||     :..||::.|.|||   :|| ..||:.:...|.||..|||||     |||:.:.|. ..
  Rat   142 PP-----QDKYRTITGHCNN---RRSPTLGASNRAFVRWLPAEYEDGISLPFGWTPKVNRSGFKV 198

  Fly   285 PLLGARKISRT--------LLSDVDRPHPKYNLMVMQFGQVLAHDISQT--SSIRLEDGSLVQCC 339
            ||  ||::|..        |..|.:|.     ||.||:||.|.|||:.|  .:.|....:.:.| 
  Rat   199 PL--ARQVSNAIVRFPNDQLTKDQERA-----LMFMQWGQFLDHDITLTPEPATRFSFLTGLNC- 255

  Fly   340 SPEGKVALSPQQSHFACMPIHVEPDDEFFSAFGVR----CLNFVRLSLVPSPDC---QLSYGKQL 397
                :.:...||   .|.|:.:.|:|.     .::    |:.|.|    ..|.|   .::...|:
  Rat   256 ----ETSCLQQQ---PCFPLKIPPNDP-----RIKNQKDCIPFFR----SCPACTGSNITIRNQI 304

  Fly   398 TKVTHFVDASPVYGSSDEASRSLRAFRG--GRLRM---MNDFGRDLLP---LTNDKKACPSEEAG 454
            ..:|.|||||.||||.|..:|.||....  |.|.:   ..|.||.|||   |.:|.....:..|.
  Rat   305 NALTSFVDASGVYGSEDPLARRLRNLTNQLGLLAVNTRFQDNGRALLPFDSLHDDPCLLTNRSAR 369

  Fly   455 KSCFHSGDGRTNQIISLITLQILLAREHNRVAGALHELNPSASDETLFQEARRIVIAEMQHITYN 519
            ..||.:||.|::::..|.::..|..|||||:|..|..|||..:.|.|:||||:||.|.:|.|||.
  Rat   370 IPCFLAGDMRSSEMPELTSMHTLFVREHNRLATELKRLNPRWNGEKLYQEARKIVGAMVQIITYR 434

  Fly   520 EFLPIIIGPQQMKRFRLVPLHQGYSHDYNVNVNPAITNEFSGAAYRMGHSSV-------DGKFQI 577
            ::||:::||..||::  :|.::    .||.:|:|.|.|.|:. |:|.||:.:       |.:::.
  Rat   435 DYLPLVLGPAAMKKY--LPQYR----SYNDSVDPRIANVFTN-AFRYGHTLIQPFMFRLDNQYRS 492

  Fly   578 RQEHGRIDEVVNIPDVMFNPSRMRKREFYDDMLRTLYSQPM---QQVDSSISQGLSRFLFRGDNP 639
            ...:.|    |.:..|.|...|:......|.:||.|.:.|.   :|...::.:...| ||.....
  Rat   493 TGPNPR----VPLSRVFFASWRVVLEGGIDPILRGLMATPAKLNRQNQIAVDEIRER-LFEQVMR 552

  Fly   640 FGLDLAAINIQRGRDQGLRSYNDYLELMGAPKLHSFEQF-----PIEIAQKLSRVYRTPDDIDLW 699
            .||||.|:|:||.||.||..||.:....|.|:..:..:.     .:|:|:||...|.||::||:|
  Rat   553 IGLDLPALNMQRSRDHGLPGYNAWRRFCGLPQPSTVGELGTVLKNLELARKLMAQYGTPNNIDIW 617

  Fly   700 VGGLLEKAVEGGVVGVTFAEIIADQFARFKQGDRYYYEYDNGINPGAFNPLQLQEIRKVTLARLL 764
            :||:.|.....|.||...|.:|..||.:.:.|||:::|     |||.|:..|.|.:..::|.|::
  Rat   618 MGGVSEPLEPNGRVGQLLACLIGTQFRKLRDGDRFWWE-----NPGVFSKQQRQALATISLPRII 677

  Fly   765 CDNSDRLTLQAVPLAAFVRADHPGNQMIGCDDPNLPSVNLEAWR 808
            |||:...|:....:  |:...|| ...:.|:  .||.:||.:|:
  Rat   678 CDNTGITTVSKNNI--FMSNSHP-RDFVSCN--TLPKLNLASWK 716

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PxtNP_650648.3 GH64-TLP-SF <67..119 CDD:295337
An_peroxidase 237..772 CDD:281139 194/581 (33%)
peroxinectin_like 396..767 CDD:188655 138/393 (35%)
MpoXP_006247157.1 myeloperoxidase_like 289..702 CDD:188656 146/432 (34%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D276568at2759
OrthoFinder 1 1.000 - - FOG0000202
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.920

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