DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pxt and ptgs1

DIOPT Version :9

Sequence 1:NP_650648.3 Gene:Pxt / 42131 FlyBaseID:FBgn0261987 Length:809 Species:Drosophila melanogaster
Sequence 2:NP_705942.1 Gene:ptgs1 / 246226 ZFINID:ZDB-GENE-020530-1 Length:597 Species:Danio rerio


Alignment Length:631 Identity:135/631 - (21%)
Similarity:217/631 - (34%) Gaps:168/631 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   216 TETPLAHH-CQPPPVCGNIRSVYRSMDGT--------CNNPEPQRSLWGAAGQPMERMLPPA--- 268
            |..|..:: ||...:|..........|.|        |..||    ||    ..:.|:|.|:   
Zfish    32 TANPCCYYPCQNQGICVRYGLERYECDCTRTGYYGENCTIPE----LW----TRVYRLLKPSPNV 88

  Fly   269 ------YEDGIWTPRAHSSDGTPLLGARKISRTLLSD-------------VDRPHPKYNLM---- 310
                  :.|.:|.               .|:|:.|.|             :..| |.||..    
Zfish    89 VHYILTHFDWLWD---------------LINRSFLRDWLMRKVLTVRANLIPSP-PTYNSRYDYL 137

  Fly   311 -------VMQFGQVL---AHD----ISQTSSIRLEDGS-LVQCCSPEGKVALSPQQSH--FACMP 358
                   :..:.::|   .:|    :.....|:|.|.. ||:.........|.||.::  ||...
Zfish   138 NWEAYSNITYYTRILPPVPNDCPTPMGTKGKIKLPDPKLLVEKFMLRRNFRLDPQGTNLMFAFFA 202

  Fly   359 IHVEPDDEFFSAFGVRCLNFVRLSLVPSPDCQLSYGKQLTKVTHFVDASPVYGSSDEASRSLRAF 423
            .|.  ..:||.......|.|.:                  .:.|.|||..:||.|.:....||..
Zfish   203 QHF--THQFFKTHNRVGLGFTK------------------GLGHGVDAGHIYGDSLDRQLELRLH 247

  Fly   424 RGGRLR--MMNDFGRDLLPLT----NDKKACPSEEAGKSCFHSGDGRTNQIISLITLQILLAREH 482
            :.|:|:  ::|.   |:.|.|    ..|.:.|.....:.....|......:..|.....|..|||
Zfish   248 KDGKLKYQVLNG---DIYPPTVLHAQVKMSYPPSVPPEQQLAIGQEVFGLLPGLGMYATLWLREH 309

  Fly   483 NRVAGALHELNPSASDETLFQEARRIVIAEMQHITYNEFLPIIIGPQQMKRFRLVPLH------- 540
            |||...|.:.:|:..||.|||.||.|:|.|...|...|::      |.:..:|| .||       
Zfish   310 NRVCEILKQEHPTWGDEQLFQTARLIIIGETIRIVIEEYV------QHLSGYRL-KLHFDPTLLF 367

  Fly   541 -QGYSHDYNVNVNPAITNEFSGAAYRMGHSSVDGKFQIRQEHGRIDEVVNIPDVMFNPSRMRKRE 604
             ..:.:...::|      ||:...:  .|..:...|.|..:|      :.....:||.|.:....
Zfish   368 NSQFQYQNRISV------EFNQLYH--WHPLMPDSFYIDGDH------IQYSKFIFNTSILTHYG 418

  Fly   605 FYDDMLRTLYSQPMQQVDSSISQGLSRFLFRGDN--PFGLDLAAINIQRGRDQGLRSYNDYLELM 667
            . :.::.....||..|:..            |.|  |....:|...|...|:..|:.:|:|.:..
Zfish   419 L-EKLVEAFSIQPAGQIGG------------GHNIHPVVSGVAERVIVESRELRLQPFNEYRKRF 470

  Fly   668 GAPKLHSF-----EQFPIEIAQKLSRVYRTPDDIDLWVGGLLEKAVEGGVVGVTFAEIIADQFAR 727
            ......||     ||   |::::|..:|...|.::.:...||||...|.|.|.:..|:.|....:
Zfish   471 NLKPYTSFAELTGEQ---EMSKELEELYGHIDAMEFYPALLLEKTRPGAVFGESMVEMGAPFSLK 532

  Fly   728 FKQGDRY----YYEYDNGINPGAF-NPLQLQEIRKVTLARLLCDNS 768
            ...|:..    |::      |..| .......:...||.:|:|.|:
Zfish   533 GLMGNPICSPDYWK------PSTFGGKTGFDIVNSATLKKLVCLNT 572

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PxtNP_650648.3 GH64-TLP-SF <67..119 CDD:295337
An_peroxidase 237..772 CDD:281139 130/609 (21%)
peroxinectin_like 396..767 CDD:188655 92/396 (23%)
ptgs1NP_705942.1 EGF 36..68 CDD:278437 5/31 (16%)
prostaglandin_endoperoxide_synthase 90..576 CDD:188648 120/565 (21%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2408
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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