DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pxt and Ptgs1

DIOPT Version :9

Sequence 1:NP_650648.3 Gene:Pxt / 42131 FlyBaseID:FBgn0261987 Length:809 Species:Drosophila melanogaster
Sequence 2:NP_032995.1 Gene:Ptgs1 / 19224 MGIID:97797 Length:602 Species:Mus musculus


Alignment Length:554 Identity:122/554 - (22%)
Similarity:193/554 - (34%) Gaps:142/554 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   295 TLLSDVDRPHPKYNLMVMQFGQVLAHDISQTSSI-------RLEDGSLVQCCSP---EGKVAL-- 347
            |:.|::....|.||         .|||.....|.       |:.......|.:|   :||..|  
Mouse   120 TVRSNLIPSPPTYN---------SAHDYISWESFSNVSYYTRILPSVPKDCPTPMGTKGKKQLPD 175

  Fly   348 ----------------SPQQSH--FACMPIHVEPDDEFFSAFGVRCLNFVRLSLVPSPDCQLSYG 394
                            :||.::  ||....|.  ..:||...|                   ..|
Mouse   176 VQLLAQQLLLRREFIPAPQGTNILFAFFAQHF--THQFFKTSG-------------------KMG 219

  Fly   395 KQLTK-VTHFVDASPVYGSSDEASRSLRAFRGGRLRMMNDFGRDLLP-------LTNDKKACPSE 451
            ...|| :.|.||...:||.:.|....||.|:.|:|:.....|....|       |.......|.|
Mouse   220 PGFTKALGHGVDLGHIYGDNLERQYHLRLFKDGKLKYQVLDGEVYPPSVEQASVLMRYPPGVPPE 284

  Fly   452 E---AGKSCFHSGDGRTNQIISLITLQILLAREHNRVAGALHELNPSASDETLFQEARRIVIAE- 512
            .   .|:..|       ..:..|:....:..||||||...|.|.:|:..||.|||..|.|:|.| 
Mouse   285 RQMAVGQEVF-------GLLPGLMLFSTIWLREHNRVCDLLKEEHPTWDDEQLFQTTRLILIGET 342

  Fly   513 --------MQHITYNEFLPIIIGPQQMKRFRLVPLHQGYSHDYNVNVNPAITNEFSGAAYRMGHS 569
                    :||:: ..||.:...|:.:.|.:.             .....|..||:...:  .|.
Mouse   343 IKIVIEEYVQHLS-GYFLQLKFDPELLFRAQF-------------QYRNRIAMEFNHLYH--WHP 391

  Fly   570 SVDGKFQI-RQEHGRIDEVVNIPDVMFNPSRMRKREFYDDMLRTLYSQPMQQVDSSISQGLSRFL 633
            .:...||: .||:       :....:||.|.:     .|..:..|.....:|....|..|     
Mouse   392 LMPNSFQVGSQEY-------SYEQFLFNTSML-----VDYGVEALVDAFSRQRAGRIGGG----- 439

  Fly   634 FRGDNPFGLDLAAINIQRGRDQGLRSYNDYLELMGAPKLHSFEQF--PIEIAQKLSRVYRTPDDI 696
             |..:...|.:|...|:..|:..|:.:|:|.:..|.....||::.  ..|:|.:|..:|...|.:
Mouse   440 -RNFDYHVLHVAVDVIKESREMRLQPFNEYRKRFGLKPYTSFQELTGEKEMAAELEELYGDIDAL 503

  Fly   697 DLWVGGLLEKAVEGGVVGVTFAEIIADQFARFKQGD-----RYYYEYDNGINPGAF-NPLQLQEI 755
            :.:.|.||||.....:.|.:..|:.|....:...|:     .|:       .|..| ..:....:
Mouse   504 EFYPGLLLEKCQPNSIFGESMIEMGAPFSLKGLLGNPICSPEYW-------KPSTFGGDVGFNLV 561

  Fly   756 RKVTLARLLCDNSDRLTLQAVPLAAFVRADHPGN 789
            ...:|.:|:|     |..:..|..:|...|:||:
Mouse   562 NTASLKKLVC-----LNTKTCPYVSFRVPDYPGD 590

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PxtNP_650648.3 GH64-TLP-SF <67..119 CDD:295337
An_peroxidase 237..772 CDD:281139 116/535 (22%)
peroxinectin_like 396..767 CDD:188655 92/399 (23%)
Ptgs1NP_032995.1 EGF_CA 35..72 CDD:238011
prostaglandin_endoperoxide_synthase 92..578 CDD:188648 117/540 (22%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2408
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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