DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pxt and skpo-3

DIOPT Version :9

Sequence 1:NP_650648.3 Gene:Pxt / 42131 FlyBaseID:FBgn0261987 Length:809 Species:Drosophila melanogaster
Sequence 2:NP_495511.1 Gene:skpo-3 / 174191 WormBaseID:WBGene00017968 Length:1000 Species:Caenorhabditis elegans


Alignment Length:729 Identity:223/729 - (30%)
Similarity:344/729 - (47%) Gaps:131/729 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   133 PAVLDEARRNF----------------EHLMHGVAQIPVRRGFPDFAHGLVFHSTAKDDLHNFAI 181
            |||....||.|                .|........|..|.|.:...    ::..:|.:::..:
 Worm   348 PAVFFTTRRTFPPPTTTTTTTTQAPATTHFTREFTPPPTTRSFINTGS----NARCRDIINDPIV 408

  Fly   182 SNSAI---EQVMTTQLFGKKEQVPVEDFITNNVPIKFTETPLAHHCQP--------PPVCGNIRS 235
            :...:   ..|:.|:...:::.|.::..|.:|.         |:.|.|        ..:|.|  :
 Worm   409 AAEDMWRERLVVATEDNTRRQTVDLDQVIRSNT---------ANACTPRLDEADCEANICYN--A 462

  Fly   236 VYRSMDGTCNN--PEPQRSLWGAAGQPMERMLPPAYEDGIWTP-RAHSSDGTPLLGARKISRTLL 297
            ::|::||||||  .||.|   ||:.:|..|:||..|::.:..| .:..:|..|  ..|:|:|.|.
 Worm   463 MFRTLDGTCNNMKGEPLR---GASYRPYTRLLPTIYDNEVSEPVGSLFTDARP--SPREITRRLT 522

  Fly   298 -SDVDRPHPKYNLMVMQFGQVLAHDISQTSSIRLEDGSLVQCCSPEGKVALSPQQSHFACMPIHV 361
             |......|.||.::|||||.::||:::|:.:            |..|..:. |.....||.:.:
 Worm   523 SSQASVESPDYNALIMQFGQFISHDMAKTTLV------------PSSKCNVC-QNITSRCMSVPI 574

  Fly   362 EPDDEFFSAFGVRCLNFVRLSLVPSPDC---QLSYGKQLTKVTHFVDASPVYGSSDEASRSLRAF 423
            ..||...:....:|:...|    .||.|   .|...:||.:.|.::||||:||||...|:..|..
 Worm   575 TFDDSNANFRQAQCIRVSR----SSPICGSGNLKPRQQLNENTGYIDASPIYGSSVHDSKKFRDG 635

  Fly   424 RGGRLRMMNDFGRDLLPLTNDKKACPSEEAGKSCFHSGDGRTNQIISLITLQILLAREHNRVAGA 488
            ..|.|::....|:..||.  |:..|.:.......|.:||.|.|..:.|.....:...||||:..|
 Worm   636 NSGFLKLPMFNGKAFLPF--DQNKCRNRGQCSVIFTAGDSRVNLFVGLSAWHTIFTEEHNRLVTA 698

  Fly   489 LHELNPSASDETLFQEARRIVIAEMQHITYNEFLPIIIGPQQMKRFRLVPLHQGYSHDYNVNVNP 553
            ...|||....|.|:||||:::.|::|.|.|.|:||.::|....   .:|..::||..|    |:.
 Worm   699 FKRLNPHWDGERLYQEARKMIGAQVQAIVYREWLPKVLGASFA---TVVGDYRGYDSD----VDS 756

  Fly   554 AITNEFSGAAYRMGHSSVDGKFQIRQEHGRIDEVVNIPDVMFNPSRMRKREFYDDML-------- 610
            .:.|||:.||:|.||..:...:|      |:|.  :..::.|.....:|...:.|:|        
 Worm   757 TVANEFTSAAFRFGHGMIQEFYQ------RLDN--SFRNISFGALPFQKGTLHSDVLVNEGGVDP 813

  Fly   611 --RTLYSQPM---QQVDSSISQGLSRFLFRGDNPFG-LDLAAINIQRGRDQGLRSYNDYLELMGA 669
              |.::||.:   |:|.::::          :|.|| .||:.||||||||.|..:|..|.||.|.
 Worm   814 LIRGMFSQNVKRPQRVTTTVT----------ENMFGSTDLSTINIQRGRDHGHPAYVKYRELCGM 868

  Fly   670 PKLHSFEQFPIEI-----AQKLSRVYRTPDDIDLWVGGLLEKAVEGGVVGVTFAEIIADQFARFK 729
            ....:||....||     ..||..:|.:.|.||||||.|||..:..|:||.|.|.||..||.|.:
 Worm   869 GTAFNFEHLSREILNTGTRNKLQEIYGSVDKIDLWVGALLEDPIIRGLVGPTVACIIGPQFKRTR 933

  Fly   730 QGDRYYYEYDNGINPGAFNPLQLQEIRKVTLARLLCDNSDRLTLQAVPLAAFVRADHPGNQMIGC 794
            .|||:|||     |||.|:..||.||||.:|:|::|||::  |:..:|..|| |..|    |:.|
 Worm   934 DGDRFYYE-----NPGVFSRRQLVEIRKSSLSRIICDNTN--TISTIPREAF-RVGH----MVPC 986

  Fly   795 DDPNLPSVNLEAWR 808
            .  .:||::|..||
 Worm   987 S--QIPSMDLNQWR 998

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PxtNP_650648.3 GH64-TLP-SF <67..119 CDD:295337
An_peroxidase 237..772 CDD:281139 189/560 (34%)
peroxinectin_like 396..767 CDD:188655 138/389 (35%)
skpo-3NP_495511.1 ShKT 41..75 CDD:214586
An_peroxidase 464..978 CDD:376988 191/569 (34%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 297 1.000 Inparanoid score I1651
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D276568at2759
OrthoFinder 1 1.000 - - FOG0000202
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
65.970

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