DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment osa and Arid1b

DIOPT Version :9

Sequence 1:NP_001163639.1 Gene:osa / 42130 FlyBaseID:FBgn0261885 Length:2716 Species:Drosophila melanogaster
Sequence 2:XP_006523284.2 Gene:Arid1b / 239985 MGIID:1926129 Length:2306 Species:Mus musculus


Alignment Length:2856 Identity:755/2856 - (26%)
Similarity:1045/2856 - (36%) Gaps:940/2856 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 GGAPAPAATPPSAGAAPGAATP-PTSG------------PPTP-----------------NNNSN 50
            |..|||.|.....||....|.| |..|            |..|                 :|::.
Mouse    23 GPRPAPGARDLETGARGAVAAPGPILGGGDGGLNNVHHHPLHPRHDLNMAHSASAAAAASSNSAQ 87

  Fly    51 NGSDPSIQQQQQNVAPHPYGAPPPPGSGPGGPPGPDPAAVMHYHHLHQQQQQHPPPPHMQQQQHH 115
            :|...:..::..:.|.....|.....|...||.......::..|.|....:....|||.|...||
Mouse    88 SGRSEAALKEGGSAAALSSSAAVAASSSSAGPGSTMETGLLPNHKLKAVGEAPAAPPHQQHHHHH 152

  Fly   116 GGPAPPPPGGAPEHAPGVKEEYTHLPPPHPHPAYGRYHADPNMDPYRYGQPLPGGKPPQQQQPHP 180
                      |..|              |.|.|:..:|...:   :...|.|     .|.|||  
Mouse   153 ----------AHHH--------------HHHHAHHLHHLHHH---HALQQQL-----NQFQQP-- 183

  Fly   181 QQQPPQQPGPGGSPNRPPQQRYIPGQPPQGPTPTLNSLLQSSNPPPPPQHRYANTYDPQQAAASA 245
              ||||           |||:    |||               |||..||..||.        |.
Mouse   184 --QPPQ-----------PQQQ----QPP---------------PPPQQQHPTANN--------SL 208

  Fly   246 AAAAAAQQQQAGGPPPPGHGPPPPQHQPSPYGGQQGGWAPPPRPYSPQLGPSQQYRTPPPTNTSR 310
            ..|       .||.|.||.....|||     ||.:...|      ..|..|..|    |..:...
Mouse   209 GGA-------GGGAPQPGPDMEQPQH-----GGAKDSVA------GNQADPQGQ----PLLSKPG 251

  Fly   311 GQSPYPPAHGQNSGSYPSSPQQQQQQQQQQQQQAGQQPGG------------------PVPGGP- 356
            .:...||..|:.:||....|....|||....    ..|||                  |..||| 
Mouse   252 DEDDAPPKMGEPAGSRYEHPGLGAQQQPAPV----AVPGGGGGPAAVSEFNNYYGSAAPASGGPG 312

  Fly   357 --------------PPGTG-------------QQPPQQNTP---PTSQYSPYPQRYPTPPGLPAG 391
                          .||.|             ...|.||:.   |.|||:.||..  :.||...|
Mouse   313 GRAGPCFDQHGGQQSPGMGMMHSASAAAGAPSSMDPLQNSHEGYPNSQYNHYPGY--SRPGAGGG 375

  Fly   392 GSNHRTAYSTHQYPEPNRPWPGGSSPSPGSGHPLPPASPHHVPPLQQQPPPPPHVSAGGPPPSSS 456
            |..                  ||.....|.|.....|.                 .|||...:::
Mouse   376 GGG------------------GGGGGGSGGGGGGGGAG-----------------GAGGAAAAAA 405

  Fly   457 PGHAPSPSPQPSQASPSPHQELIGQNSNDSSSGGAHSGMGSGPPG-----TPNPQ---QVMRPTP 513
            ...|.:.:...:.|:.:            ::.||...|.||...|     :|..|   .:|.|  
Mouse   406 GAGAVAAAAAAAAAAAA------------AAGGGGGGGYGSSSSGYGVLSSPRQQGGGMMMGP-- 456

  Fly   514 SPTGSSGSRSMSPAVA--------------QN-HPI-SRPASNQ-SSSGGPMQQ------PPVGA 555
               |..|:.|:|.|.|              || ||. :.|..|| .:|..||.:      |...:
Mouse   457 ---GGGGAASLSKAAAGAAAAAGGFQRFAGQNQHPSGATPTLNQLLTSPSPMMRSYGGSYPDYSS 518

  Fly   556 GGPPPMPPHPGMPGGPPQQQQSQ---------QQQASN------------SASSASNSPQQTPPP 599
            ...||          ||.|.|||         ||.|:.            :||.|..:.||...|
Mouse   519 SSAPP----------PPSQPQSQAAAGAAAGGQQAAAGMGLGKDLGAQYAAASPAWAAAQQRSHP 573

  Fly   600 A-----PPPNQG----------------MNNMATPP--PPPQGA--AGGGYPMPPHMHGGYKMGG 639
            |     |.|..|                :..|.|.|  .|.|.:  .||.|..|....  |.:|.
Mouse   574 AMSPGTPGPTMGRSQGSPMDPMVMKRPQLYGMGTHPHSQPQQSSPYPGGSYGPPGAQR--YPLGM 636

  Fly   640 PGQSPGAQG---YPPQQ-PQQY---------------------PPGNYPPRPQY--PPGA----- 672
            .|::|||.|   ||.|| |.||                     .|.:.||:.||  |..|     
Mouse   637 QGRAPGALGGLQYPQQQMPPQYGQQAVSGYCQQGQQPYYNQQPQPSHLPPQAQYLQPAAAQSQQR 701

  Fly   673 -----------YATGPPPP------------------PTSQAG-AGGANSMPSGAQA-------- 699
                       |.|...||                  |:|... :|..:.:|:|.:|        
Mouse   702 YQPQQDMSQEGYGTRSQPPLAPGKSNHEDLNLIQQERPSSLPDLSGSIDDLPTGTEATLSSAVSA 766

  Fly   700 -GGYPGRGMPNHTGQYP--PYQWVPPSPQ-QTVPGG---APGGAMVGNHVQGKGTPPPPVVGG-- 755
             |....:|..::..|.|  |:    .||. .::|||   :|.|:.||::....|...|..:.|  
Mouse   767 SGSTSSQGDQSNPAQSPFSPH----ASPHLSSIPGGPSPSPVGSPVGSNQSRSGPISPASIPGSQ 827

  Fly   756 -PPPPQG-----------SGSPRPLNYLKQHLQHKGGYGGSPTPPQGPQGYGNGPTGMHPGMPM- 807
             ||.|.|           |.||.|        |.:|.|..:||....|....:||   .|||.: 
Mouse   828 MPPQPPGSQSESSSHPALSQSPMP--------QERGNYSRTPTYSGVPSASYSGP---GPGMGIN 881

  Fly   808 --GPPHHMGP--PHGPTNMGPPTSTPPQSQMLQGGQ----PQGQGAS--GGPESGGP-------- 854
              ...|..||  |.|...:|...|...|::...|..    |...|.|  |||..|.|        
Mouse   882 ANNQMHGQGPAQPCGAMPLGRMPSAGMQNRPFPGTMSSVTPSSPGMSQQGGPGMGPPMPTVNRKA 946

  Fly   855 ----EHISQDNGISSSGPTGA-AGMHAVTSVVTTGPDGTSMDE-----------VSQQSTLSNAS 903
                ..:.|....|:....|: .||:....|.::.|...||:.           .|...|:.|:|
Mouse   947 QEAAAAVMQAAANSAQSRQGSFPGMNQSGLVASSSPYSQSMNNNSSLMSTQAQPYSMTPTMVNSS 1011

  Fly   904 AAS---------------------GEDPQCTTPKSRKNDPYSQSHLAPPSTS---PHPVVMHPGG 944
            .||                     |::...:.|:|:..|.|....::.|.|.   |.|..|.|..
Mouse  1012 TASMGLADMMSPSESKLSVPLKADGKEEGVSQPESKSKDSYGSQGISQPPTPGNLPVPSPMSPSS 1076

  Fly   945 GP-----GEEYDMSSPPNWPRPAGSPQVFNHVPVPQEPFRSTITTTKKSDSLCKLYEMDDNPDRR 1004
            ..     |:|.|..|.|.||:            .|..|..|:.:||  .:.:.|:||:.:.|:|:
Mouse  1077 ASISSFHGDESDSISSPGWPK------------TPSSPKSSSSSTT--GEKITKVYELGNEPERK 1127

  Fly  1005 GWLDKLRAFMEERRTPITACPTISKQPLDLYRLYIYVKERGGFVEVTKSKTWKDIAGLLGIGASS 1069
            .|:|:...|||||.:|:::.|.:.|:||||:|||:.|||.||..:|.|:|.|:::|..|.:|.||
Mouse  1128 LWVDRYLTFMEERGSPVSSLPAVGKKPLDLFRLYVCVKEIGGLAQVNKNKKWRELATNLNVGTSS 1192

  Fly  1070 SAAYTLRKHYTKNLLTFECHFDRGDIDPLPIIQQVEAGSKKKTAKAASVPSP-GGGHLDAGTTNS 1133
            |||.:|:|.|.:.|..|||..:||: :|.|  :....|..||..| ...||| ..|.|....|..
Mouse  1193 SAASSLKKQYIQYLFAFECKTERGE-EPPP--EVFSTGDSKKQPK-LQPPSPANSGSLQGPQTPQ 1253

  Fly  1134 TGSSNSQDSFPAPPGSAPNAAIDGYPGYPGGSPYPVASGPQPDYATAGQMQRPPSQNNPQTPHPG 1198
            :..|||....|.          |..|..|..:|:             |||  .|.|:        
Mouse  1254 STGSNSMAEVPG----------DLKPPTPASTPH-------------GQM--TPMQS-------- 1285

  Fly  1199 AAAAVAAGDNISVSNPFEDPIAAGGGPGSGTGPGPGQGPGPGAASGGAGAVGAVGGGPQPHPPPP 1263
                 .....:||.:||.|                        .|..|        .|:.:...|
Mouse  1286 -----GRSSTVSVHDPFSD------------------------VSDSA--------YPKRNSMTP 1313

  Fly  1264 HSPHTAAQQAAGQHQQQHPQHQHPGLPGPPPPQQQQGQQGQQPPPSVGGGPPPAPQQHGPGQVPP 1328
            ::|:                                 |||...|..:             |::|.
Mouse  1314 NAPY---------------------------------QQGMGMPDMM-------------GRMPY 1332

  Fly  1329 SPQQHVRPAAGAPYPPGGSGYPTPVSRTPGSPYPSQPGAYGQYGSSDQYNATGPPGQPFGQGPGQ 1393
            .|.:.  |.:|....||.|           .|:.:| |.....|..|.||.: |.|.....|.||
Mouse  1333 EPNKD--PFSGMRKVPGSS-----------EPFMTQ-GQVPNSGMQDMYNQS-PSGAMSNLGMGQ 1382

  Fly  1394 YPPQNRNMYP----------PYGPE--GEAPPTGANQYGPYGSRPYSQPPPGGPQPPTQTVAGGP 1446
                 |..:|          .||.:  |:.||||             |||.||.||         
Mouse  1383 -----RQQFPYGTSYDRRHEAYGQQYPGQGPPTG-------------QPPYGGHQP--------- 1420

  Fly  1447 PAGGAPGAPPSSAYPTGRPSQQDYYQPPPD--QSPQPRRHPDFIKD----SQPYPGYNARPQIYG 1505
                       ..||     ||..|:...|  ..|..:||...:.:    ||....||.    ||
Mouse  1421 -----------GLYP-----QQPNYKRHMDGMYGPPAKRHEGDMYNMQYGSQQQEMYNQ----YG 1465

  Fly  1506 AWQSGTQQYRPQYPSSPAPQNWGGAPPRGAAPPPG--APHGPPIQQPAGVAQWDQHRYPPQQGPP 1568
            ...||..: ||.....|.|.|      |.....||  .|||.|.|...|         |.|....
Mouse  1466 GSYSGPDR-RPIQGQYPYPYN------RERMQGPGQMQPHGIPPQMMGG---------PMQSSSS 1514

  Fly  1569 PPPQQQQQPQQQQQQPPYQQVAGPPGQQPPQAPPQWAQMNPGQTAQSGIAPPGSPLRPPSGPGQQ 1633
            ..|||.....:.....|||...||.|  |.||||.                          || .
Mouse  1515 EGPQQNMWATRNDMPYPYQSRQGPGG--PAQAPPY--------------------------PG-M 1550

  Fly  1634 NRMPGMPAQQQ----QSQQQGGVPQPPPQQASHGGVPSPGLPQVGPGGMVKPPYAMPPPPSQGVG 1694
            ||...|...:|    :||....|.|..|..:|...:               .|...||..|.   
Mouse  1551 NRTDDMMVPEQRINHESQWPSHVSQRQPYMSSSASM---------------QPITRPPQSSY--- 1597

  Fly  1695 QQVGQGPPG--GMMSQKPPPMPGQAMQQQPLQQQPPSHQHPH-PHQHPQHQHPHQMPPNQTAPGG 1756
                |.||.  ..:|:.|.|    |..|:.|:.:....:.|. |....|...| .:|.:|..   
Mouse  1598 ----QTPPSLPNHISRAPSP----ASFQRSLESRMSPSKSPFLPTMKMQKVMP-TVPTSQVT--- 1650

  Fly  1757 YGPPGMPGGGAQLVKKELIFPHDSVESTTPVLYRRKRLMKADVCPVDPWRIFMAMRSGLLTECTW 1821
             |||..|    ..:::|:.||..|||::.|:|.:|:::...|:...:.||:.|:::||||.|.||
Mouse  1651 -GPPPQP----PPIRREITFPPGSVEASQPILKQRRKITSKDIVTPEAWRVMMSLKSGLLAESTW 1710

  Fly  1822 ALDVLNVLLFDDSTVQFFGISNLPGLLTLLLEHFQKNLAEMF----------------DERENEE 1870
            |||.:|:||:|||||..|.:|.|.|.|.||:|:|:|.|.::|                |.|..::
Mouse  1711 ALDTINILLYDDSTVATFNLSQLSGFLELLVEYFRKCLIDIFGILMEYEVGDPSQKALDHRSGKK 1775

  Fly  1871 QSALLAED----ADDDADSGTVMCEKLRTSGRQPRCVRSISSYNRRRHYENMDRSGKDGAGNGSD 1931
            ..:...||    .||||:                 |   :.........|..|....:..|..|.
Mouse  1776 DDSQSLEDDSGKEDDDAE-----------------C---LVEEEEEEEEEEEDSEKIESEGKSSP 1820

  Fly  1932 SEDA-DEGIDLGQVRVQPNPEERSLLLSFTPNYTMVTRKGVPVRIQPAENDIFVDERQ----KAW 1991
            :..| |..:|         |:|       ||.......| :|::| ..:|.:||.:|.    :..
Mouse  1821 ALAAPDASVD---------PKE-------TPKQASKFDK-LPIKI-VKKNKLFVVDRSDKLGRVQ 1867

  Fly  1992 DIDTNRLYEQLEPVGSDAWTYGFTEPDPLDGIIDVFKSEIVNIPFARYIRSDKKGRKRTELASSS 2056
            :..:..|:.||.  |.|.                   :|.:...|...:....:.|....|:|:.
Mouse  1868 EFSSGLLHWQLG--GGDT-------------------TEHIQTHFESKMEIPPRRRPPPPLSSTG 1911

  Fly  2057 RKPEIKTEENSTEEQTFNKKRRLVSGGSSSSGAHAEGKKSKLTSEEFAQPNAEVKKEPGTADSDC 2121
            :|.|::.:.:|.|:.                      :||.:     |..:..:...||....|.
Mouse  1912 KKKELEGKGDSEEQP----------------------EKSII-----ATIDDVLSARPGALPEDT 1949

  Fly  2122 RPVDMDIEAPQQ---RLTNGVAPCSSTPAIFDPRTTAKDEARVLQRRRDSSFEDECYTRDEASLH 2183
            .|      .||.   :...|:....|                   .|.....|||..:|||..|.
Mouse  1950 NP------GPQTDSGKFPFGIQQAKS-------------------HRNIRLLEDEPRSRDETPLC 1989

  Fly  2184 LVSESQDSLARRCIALSNIFRNLTFVPGNETVLAKSTRFLAVLGRLLLLNHEHLRRTPKTRNYDR 2248
            .::..|||||:|||.:|||.|:|:|||||:..::|....:.:||:|:||:|||..|....:.|::
Mouse  1990 TIAHWQDSLAKRCICVSNIVRSLSFVPGNDAEMSKHPGLVLILGKLILLHHEHPERKRAPQTYEK 2054

  Fly  2249 EEDTDFSDSCSSLQGEREWWWDYLITIRENMLVAMANIAGHLELSRYDELIARPLIDGLLHWAVC 2313
            |||.|...:||    :.|||||.|..:|:|.||.:|||:|.|:||.|.|.|..|::||||||.||
Mouse  2055 EEDEDKGVACS----KDEWWWDCLEVLRDNTLVTLANISGQLDLSAYTESICLPILDGLLHWMVC 2115

  Fly  2314 PSAHGQDPFPSCGPNSVLSPQRLALEALCKLCVTDANVDLVIATPPFSRLEKLCAVLTRHLCRNE 2378
            |||..|||||:.|||||||||||.||.||||.:.|.||||::|||||||.||..|.|.|::...:
Mouse  2116 PSAEAQDPFPTVGPNSVLSPQRLVLETLCKLSIQDNNVDLILATPPFSRQEKFYATLVRYVGDRK 2180

  Fly  2379 DQVLREFSVNLLHYLAAADSAMARTVALQSPCISYLVAFIEQAEQTALGVANQHGINYLRENPDS 2443
            :.|.||.|:.||..||..|:..||.:|:|...|..|::|:|.....|....:||.:.:: :.|..
Mouse  2181 NPVCREMSMALLSNLAQGDTLAARAIAVQKGSIGNLISFLEDGVTMAQYQQSQHNLMHM-QPPPL 2244

  Fly  2444 MGTSLDMLRRAAGTLLHLAKHPDNRSLFMQQEQRLLGLVMSHILDQQVALIISRVLYQVSR 2504
            ...|:||:.|||..||.:|:..:|||.|:..|.|||.:.:|.:|:..||.:|..||:|:.:
Mouse  2245 EPPSVDMMCRAAKALLAMARVDENRSEFLLHEGRLLDISISAVLNSLVASVICDVLFQIGQ 2305

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
osaNP_001163639.1 BRIGHT 1001..1092 CDD:128777 43/90 (48%)
DUF3518 2191..2451 CDD:288854 127/259 (49%)
Arid1bXP_006523284.2 PHA03307 568..>923 CDD:223039 92/371 (25%)
ARID_ARID1B 1124..1216 CDD:350641 43/91 (47%)
Med15 1237..>1617 CDD:312941 139/628 (22%)
BAF250_C 1997..2252 CDD:403301 127/259 (49%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167846079
Domainoid 1 1.000 253 1.000 Domainoid score I2065
eggNOG 1 0.900 - - E1_KOG2510
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 602 1.000 Inparanoid score I937
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG46609
OrthoDB 1 1.010 - - D135670at33208
OrthoFinder 1 1.000 - - FOG0002548
OrthoInspector 1 1.000 - - otm43665
orthoMCL 1 0.900 - - OOG6_104640
Panther 1 1.100 - - O PTHR12656
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4068
SonicParanoid 1 1.000 - - X2249
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1312.930

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