Sequence 1: | NP_001163639.1 | Gene: | osa / 42130 | FlyBaseID: | FBgn0261885 | Length: | 2716 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_006523284.2 | Gene: | Arid1b / 239985 | MGIID: | 1926129 | Length: | 2306 | Species: | Mus musculus |
Alignment Length: | 2856 | Identity: | 755/2856 - (26%) |
---|---|---|---|
Similarity: | 1045/2856 - (36%) | Gaps: | 940/2856 - (32%) |
- Green bases have known domain annotations that are detailed below.
Fly 16 GGAPAPAATPPSAGAAPGAATP-PTSG------------PPTP-----------------NNNSN 50
Fly 51 NGSDPSIQQQQQNVAPHPYGAPPPPGSGPGGPPGPDPAAVMHYHHLHQQQQQHPPPPHMQQQQHH 115
Fly 116 GGPAPPPPGGAPEHAPGVKEEYTHLPPPHPHPAYGRYHADPNMDPYRYGQPLPGGKPPQQQQPHP 180
Fly 181 QQQPPQQPGPGGSPNRPPQQRYIPGQPPQGPTPTLNSLLQSSNPPPPPQHRYANTYDPQQAAASA 245
Fly 246 AAAAAAQQQQAGGPPPPGHGPPPPQHQPSPYGGQQGGWAPPPRPYSPQLGPSQQYRTPPPTNTSR 310
Fly 311 GQSPYPPAHGQNSGSYPSSPQQQQQQQQQQQQQAGQQPGG------------------PVPGGP- 356
Fly 357 --------------PPGTG-------------QQPPQQNTP---PTSQYSPYPQRYPTPPGLPAG 391
Fly 392 GSNHRTAYSTHQYPEPNRPWPGGSSPSPGSGHPLPPASPHHVPPLQQQPPPPPHVSAGGPPPSSS 456
Fly 457 PGHAPSPSPQPSQASPSPHQELIGQNSNDSSSGGAHSGMGSGPPG-----TPNPQ---QVMRPTP 513
Fly 514 SPTGSSGSRSMSPAVA--------------QN-HPI-SRPASNQ-SSSGGPMQQ------PPVGA 555
Fly 556 GGPPPMPPHPGMPGGPPQQQQSQ---------QQQASN------------SASSASNSPQQTPPP 599
Fly 600 A-----PPPNQG----------------MNNMATPP--PPPQGA--AGGGYPMPPHMHGGYKMGG 639
Fly 640 PGQSPGAQG---YPPQQ-PQQY---------------------PPGNYPPRPQY--PPGA----- 672
Fly 673 -----------YATGPPPP------------------PTSQAG-AGGANSMPSGAQA-------- 699
Fly 700 -GGYPGRGMPNHTGQYP--PYQWVPPSPQ-QTVPGG---APGGAMVGNHVQGKGTPPPPVVGG-- 755
Fly 756 -PPPPQG-----------SGSPRPLNYLKQHLQHKGGYGGSPTPPQGPQGYGNGPTGMHPGMPM- 807
Fly 808 --GPPHHMGP--PHGPTNMGPPTSTPPQSQMLQGGQ----PQGQGAS--GGPESGGP-------- 854
Fly 855 ----EHISQDNGISSSGPTGA-AGMHAVTSVVTTGPDGTSMDE-----------VSQQSTLSNAS 903
Fly 904 AAS---------------------GEDPQCTTPKSRKNDPYSQSHLAPPSTS---PHPVVMHPGG 944
Fly 945 GP-----GEEYDMSSPPNWPRPAGSPQVFNHVPVPQEPFRSTITTTKKSDSLCKLYEMDDNPDRR 1004
Fly 1005 GWLDKLRAFMEERRTPITACPTISKQPLDLYRLYIYVKERGGFVEVTKSKTWKDIAGLLGIGASS 1069
Fly 1070 SAAYTLRKHYTKNLLTFECHFDRGDIDPLPIIQQVEAGSKKKTAKAASVPSP-GGGHLDAGTTNS 1133
Fly 1134 TGSSNSQDSFPAPPGSAPNAAIDGYPGYPGGSPYPVASGPQPDYATAGQMQRPPSQNNPQTPHPG 1198
Fly 1199 AAAAVAAGDNISVSNPFEDPIAAGGGPGSGTGPGPGQGPGPGAASGGAGAVGAVGGGPQPHPPPP 1263
Fly 1264 HSPHTAAQQAAGQHQQQHPQHQHPGLPGPPPPQQQQGQQGQQPPPSVGGGPPPAPQQHGPGQVPP 1328
Fly 1329 SPQQHVRPAAGAPYPPGGSGYPTPVSRTPGSPYPSQPGAYGQYGSSDQYNATGPPGQPFGQGPGQ 1393
Fly 1394 YPPQNRNMYP----------PYGPE--GEAPPTGANQYGPYGSRPYSQPPPGGPQPPTQTVAGGP 1446
Fly 1447 PAGGAPGAPPSSAYPTGRPSQQDYYQPPPD--QSPQPRRHPDFIKD----SQPYPGYNARPQIYG 1505
Fly 1506 AWQSGTQQYRPQYPSSPAPQNWGGAPPRGAAPPPG--APHGPPIQQPAGVAQWDQHRYPPQQGPP 1568
Fly 1569 PPPQQQQQPQQQQQQPPYQQVAGPPGQQPPQAPPQWAQMNPGQTAQSGIAPPGSPLRPPSGPGQQ 1633
Fly 1634 NRMPGMPAQQQ----QSQQQGGVPQPPPQQASHGGVPSPGLPQVGPGGMVKPPYAMPPPPSQGVG 1694
Fly 1695 QQVGQGPPG--GMMSQKPPPMPGQAMQQQPLQQQPPSHQHPH-PHQHPQHQHPHQMPPNQTAPGG 1756
Fly 1757 YGPPGMPGGGAQLVKKELIFPHDSVESTTPVLYRRKRLMKADVCPVDPWRIFMAMRSGLLTECTW 1821
Fly 1822 ALDVLNVLLFDDSTVQFFGISNLPGLLTLLLEHFQKNLAEMF----------------DERENEE 1870
Fly 1871 QSALLAED----ADDDADSGTVMCEKLRTSGRQPRCVRSISSYNRRRHYENMDRSGKDGAGNGSD 1931
Fly 1932 SEDA-DEGIDLGQVRVQPNPEERSLLLSFTPNYTMVTRKGVPVRIQPAENDIFVDERQ----KAW 1991
Fly 1992 DIDTNRLYEQLEPVGSDAWTYGFTEPDPLDGIIDVFKSEIVNIPFARYIRSDKKGRKRTELASSS 2056
Fly 2057 RKPEIKTEENSTEEQTFNKKRRLVSGGSSSSGAHAEGKKSKLTSEEFAQPNAEVKKEPGTADSDC 2121
Fly 2122 RPVDMDIEAPQQ---RLTNGVAPCSSTPAIFDPRTTAKDEARVLQRRRDSSFEDECYTRDEASLH 2183
Fly 2184 LVSESQDSLARRCIALSNIFRNLTFVPGNETVLAKSTRFLAVLGRLLLLNHEHLRRTPKTRNYDR 2248
Fly 2249 EEDTDFSDSCSSLQGEREWWWDYLITIRENMLVAMANIAGHLELSRYDELIARPLIDGLLHWAVC 2313
Fly 2314 PSAHGQDPFPSCGPNSVLSPQRLALEALCKLCVTDANVDLVIATPPFSRLEKLCAVLTRHLCRNE 2378
Fly 2379 DQVLREFSVNLLHYLAAADSAMARTVALQSPCISYLVAFIEQAEQTALGVANQHGINYLRENPDS 2443
Fly 2444 MGTSLDMLRRAAGTLLHLAKHPDNRSLFMQQEQRLLGLVMSHILDQQVALIISRVLYQVSR 2504 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
osa | NP_001163639.1 | BRIGHT | 1001..1092 | CDD:128777 | 43/90 (48%) |
DUF3518 | 2191..2451 | CDD:288854 | 127/259 (49%) | ||
Arid1b | XP_006523284.2 | PHA03307 | 568..>923 | CDD:223039 | 92/371 (25%) |
ARID_ARID1B | 1124..1216 | CDD:350641 | 43/91 (47%) | ||
Med15 | 1237..>1617 | CDD:312941 | 139/628 (22%) | ||
BAF250_C | 1997..2252 | CDD:403301 | 127/259 (49%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C167846079 | |
Domainoid | 1 | 1.000 | 253 | 1.000 | Domainoid score | I2065 |
eggNOG | 1 | 0.900 | - | - | E1_KOG2510 | |
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 602 | 1.000 | Inparanoid score | I937 |
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 1 | 1.010 | - | - | QHG46609 | |
OrthoDB | 1 | 1.010 | - | - | D135670at33208 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0002548 | |
OrthoInspector | 1 | 1.000 | - | - | otm43665 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_104640 | |
Panther | 1 | 1.100 | - | - | O | PTHR12656 |
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R4068 |
SonicParanoid | 1 | 1.000 | - | - | X2249 | |
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
13 | 12.930 |