DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment osa and ARID3A

DIOPT Version :9

Sequence 1:NP_001163639.1 Gene:osa / 42130 FlyBaseID:FBgn0261885 Length:2716 Species:Drosophila melanogaster
Sequence 2:NP_005215.1 Gene:ARID3A / 1820 HGNCID:3031 Length:593 Species:Homo sapiens


Alignment Length:589 Identity:143/589 - (24%)
Similarity:201/589 - (34%) Gaps:184/589 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   809 PPHHMGPPHGPTNMGPPTSTPPQSQMLQGGQPQ------------GQGAS-GGPESGGPEHISQD 860
            ||.....|.|.....|.....|:|..:|..|..            |..|| ||.|.|.|.  |::
Human    28 PPDPPAAPPGRARAAPDEDREPESARMQRAQMAALAAMRAAAAGLGHPASPGGSEDGPPG--SEE 90

  Fly   861 NGISSSGPTGAAGMHAVTSVVTTGP------DGTSMDEVSQQSTLSNASAASGEDPQCTTPKSRK 919
            ...:..|..|:.|..      ..||      |..|.:::..:..........|||      :..:
Human    91 EDAAREGTPGSPGRG------REGPGEEHFEDMASDEDMKPKWEEEEMEEDLGED------EEEE 143

  Fly   920 NDPY-------SQSHLAPPSTSPHPVVMHPGGGPGEEYDMSSPPNWPRPAGSPQVFN-------- 969
            .:.|       .:..|.||             ||.   .:.:...:||.|..||.|.        
Human   144 EEDYEDEEEEEDEEGLGPP-------------GPA---SLGTTALFPRKAQPPQAFRGDGVPRVL 192

  Fly   970 -----------------HV-PVPQEPFRSTITTTKKSDSLCKLYEMDDNPDRRGWLDKLRAFMEE 1016
                             || |..|.|.....|   ..:...:|||:|.:|.|:.:||.|.:||::
Human   193 GGQERPGPGPAHPGGAAHVAPQLQPPDHGDWT---YEEQFKQLYELDGDPKRKEFLDDLFSFMQK 254

  Fly  1017 RRTPITACPTISKQPLDLYRLYIYVKERGGFVEVTKSKTWKDIAGLLGIGAS-SSAAYTLRKHYT 1080
            |.||:...|.::||.|||:.||:.|.|:||.|||...|.|::|...|.:..| :|||:|||..|.
Human   255 RGTPVNRIPIMAKQVLDLFMLYVLVTEKGGLVEVINKKLWREITKGLNLPTSITSAAFTLRTQYM 319

  Fly  1081 KNLLTFECHFDRGDIDPLPIIQQVEA----GSKKKTAKAASVPSPGGGH-------LDAGTTNST 1134
            |.|..:||. .||..:|..:...:::    |.::....:....||||.|       |...:....
Human   320 KYLYPYECE-KRGLSNPNELQAAIDSNRREGRRQSFGGSLFAYSPGGAHGMLSSPKLPVSSLGLA 383

  Fly  1135 GSSNSQDSFPAP--------------PGSAPNAAIDGYPGYPGGSPYPVASGPQPDYATAGQ--- 1182
            .|:|.....|||              ||..| .::.|:|.....:....|:..|.  |.|.|   
Human   384 ASTNGSSITPAPKIKKEEDSAIPITVPGRLP-VSLAGHPVVAAQAAAVQAAAAQA--AVAAQAAA 445

  Fly  1183 ----------------------------MQRPPSQN--------------NPQTPHPGAAAAV-- 1203
                                        |||...||              |.|.......:||  
Human   446 LEQLREKLESAEPPEKKMALVADEQQRLMQRALQQNFLAMAAQLPMSIRINSQASESRQDSAVNL 510

  Fly  1204 --AAGDN-ISVS-------------------NPFEDPIAAGGGPGSGTGPGPGQGPGPGAASGGA 1246
              ..|.| ||:|                   .|...|...|||.|..:....|:|...|.:.|.|
Human   511 TGTNGSNSISMSVEINGIMYTGVLFAQPPAPTPTSAPNKGGGGGGGSSSNAGGRGGNTGTSGGQA 575

  Fly  1247 GAVG 1250
            |..|
Human   576 GPAG 579

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
osaNP_001163639.1 BRIGHT 1001..1092 CDD:128777 41/91 (45%)
DUF3518 2191..2451 CDD:288854
ARID3ANP_005215.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 14..222 45/223 (20%)
Acidic 119..156 5/42 (12%)
BRIGHT 239..331 CDD:128777 41/92 (45%)
Important for nuclear localization. /evidence=ECO:0000250 445..488 5/42 (12%)
Homodimerization 490..513 4/22 (18%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 497..516 3/18 (17%)
Important for cytoplasmic localization. /evidence=ECO:0000250 537..557 6/19 (32%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 539..593 13/41 (32%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1374
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
32.900

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