DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment osa and Arid3a

DIOPT Version :9

Sequence 1:NP_001163639.1 Gene:osa / 42130 FlyBaseID:FBgn0261885 Length:2716 Species:Drosophila melanogaster
Sequence 2:NP_001275554.1 Gene:Arid3a / 13496 MGIID:1328360 Length:601 Species:Mus musculus


Alignment Length:643 Identity:148/643 - (23%)
Similarity:213/643 - (33%) Gaps:214/643 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   809 PPHHMGPPHGPTNMGPPTS------TPPQSQMLQG---------------GQPQGQGAS-GGPES 851
            ||    ||..||.:...|:      .|..::|.:.               |.|...|.| .||..
Mouse    28 PP----PPPEPTGVRARTTMTDEDREPENARMHRTQMAALAAMRAAAAGLGHPSSPGGSEDGPPI 88

  Fly   852 GGPEHISQDNGISS--------SGPTGAAGMHAVTSVVTTGPDGTSMDEVSQQSTLSNASAASGE 908
            .|.|..:::..:||        .|...|.|...:..|.:...|..|..|..:...|       ||
Mouse    89 SGDEDTAREGTLSSPALHGSVLEGAGHAEGDRHLMDVGSDDDDTKSKWEEQELEEL-------GE 146

  Fly   909 DPQCTTPKSRKNDPYSQSH-----LAPPST------------SPHPVVMHPGGGPGEEYDMSSPP 956
            :.:    :..:.|.:.:..     |.||.:            :|........|||    .|.|.|
Mouse   147 EEE----EEEEEDDFEEEEEEEEGLGPPESASLGTAGLFTRKAPPAQAFRGDGGP----RMLSGP 203

  Fly   957 N--WPRPAGSPQVFNHVPVP-------QEPFRSTITTTKKSDSLCKLYEMDDNPDRRGWLDKLRA 1012
            .  .|.||....:.:.:|.|       :|.|:             :|||:|.:|.|:.:||.|.:
Mouse   204 ERLGPGPAHPSHMASQMPPPDHGDWTFEEQFK-------------QLYELDADPKRKEFLDDLFS 255

  Fly  1013 FMEERRTPITACPTISKQPLDLYRLYIYVKERGGFVEVTKSKTWKDIAGLLGIGAS-SSAAYTLR 1076
            ||::|.||:...|.::||.|||:.||:.|.|:||.|||...|.|::|...|.:..| :|||:|||
Mouse   256 FMQKRGTPVNRIPIMAKQVLDLFMLYVLVTEKGGLVEVINKKLWREITKGLNLPTSITSAAFTLR 320

  Fly  1077 KHYTKNLLTFECHFDRGDIDPLPIIQQVEA----GSKKKTAKAASVPSPGGGH-------LDAGT 1130
            ..|.|.|..:||. .||...|..:...:::    |.::....:....||.|.|       |....
Mouse   321 TQYMKYLYPYECE-RRGLSSPNELQAAIDSNRREGRRQSFGGSLFAYSPSGAHSMLPSPKLPVTP 384

  Fly  1131 TNSTGSSNSQDSFPAP--------------PGSAPNAAIDGYPGYPGGSPYPVASGPQPDYATAG 1181
            .....|:|.....|||              ||..| .::.|:|.....:....|:..|.  |.|.
Mouse   385 LGLAASTNGSSITPAPKIKKEEDSAIPITVPGRLP-VSLAGHPVVAAQAAAVQAAAAQA--AVAA 446

  Fly  1182 Q-------------------------------MQRPPSQN--------------NPQTPHPGAAA 1201
            |                               |||...|:              |.|.......:
Mouse   447 QAAALEQLREKLESTEPPEKKMALVADEQQRLMQRAVQQSFLAMTAQLPMNIRINSQASESRQDS 511

  Fly  1202 AV----AAGDNISVSNPFE--------------DPIAAGGGPGSGTGPGPGQGPGPGAASGGAGA 1248
            ||    |.|.| |:|...|              .|..|...||.|.....|.....|:.:|.:|:
Mouse   512 AVSLTSANGSN-SISMSVEMNGIVYTGVLFAQPPPPTAPSAPGKGGVSSIGTNTTTGSRTGASGS 575

  Fly  1249 VGAVGGGPQPHPPPPHSPHTAAQQAAGQHQQQHPQHQHPGLPGPPPPQQQQGQQGQQP 1306
              .|.||                              ..||||...|..........|
Mouse   576 --TVSGG------------------------------QVGLPGVSTPTMSSTSNNSLP 601

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
osaNP_001163639.1 BRIGHT 1001..1092 CDD:128777 41/91 (45%)
DUF3518 2191..2451 CDD:288854
Arid3aNP_001275554.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..224 44/214 (21%)
Acidic 128..165 7/47 (15%)
ARID_ARID3A 224..356 CDD:350642 51/145 (35%)
Important for nuclear localization 450..493 4/42 (10%)
Homodimerization. /evidence=ECO:0000250 495..518 4/22 (18%)
Important for cytoplasmic localization 542..562 5/19 (26%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 545..601 17/87 (20%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1374
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
43.900

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