DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment osa and ARID3B

DIOPT Version :9

Sequence 1:NP_001163639.1 Gene:osa / 42130 FlyBaseID:FBgn0261885 Length:2716 Species:Drosophila melanogaster
Sequence 2:NP_001294868.1 Gene:ARID3B / 10620 HGNCID:14350 Length:561 Species:Homo sapiens


Alignment Length:475 Identity:126/475 - (26%)
Similarity:168/475 - (35%) Gaps:130/475 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   814 GPPHGPTNMGPPTSTPPQSQMLQGGQPQGQGASGGPESGGPEHISQDNGIS--SSGPTGAAGMH- 875
            |.|.|.|.:||....||.:.:.|..:.....:....|.||.|....|:.::  :...|.||..: 
Human    58 GRPSGSTPLGPLARVPPTAAVAQVFERGNMNSEPEEEDGGLEDEDGDDEVAEVAEKETQAASKYF 122

  Fly   876 AVTSVVTTGPDGTSMDEVSQQSTLSNASAASGEDPQCTTPKSRKNDPYSQSHLAPPSTSPHPVVM 940
            .|..|....|         :.:.:||...|.|..|.   .:..|.|....:..|.||.|      
Human   123 HVQKVARQDP---------RVAPMSNLLPAPGLPPH---GQQAKEDHTKDASKASPSVS------ 169

  Fly   941 HPGGGPGEEYDMSSPPN----WPRPAGSPQVFNHVPVPQEPFRSTITTTKKSDSLCKLYEMDDNP 1001
             ..|.|....|.....|    |...|...:                 ..:.|....||||:|.:|
Human   170 -TAGQPNWNLDEQLKQNGGLAWSDDADGGR-----------------GREISRDFAKLYELDGDP 216

  Fly  1002 DRRGWLDKLRAFMEERRTPITACPTISKQPLDLYRLYIYVKERGGFVEVTKSKTWKDIAGLLGIG 1066
            :|:.:||.|..||::|.|||...|.::||.||||.||..|.|:||.||:...|.|::|...|.:.
Human   217 ERKEFLDDLFVFMQKRGTPINRIPIMAKQILDLYMLYKLVTEKGGLVEIINKKIWREITKGLNLP 281

  Fly  1067 AS-SSAAYTLRKHYTKNLLTFECHFDRGDIDPLPIIQQVEAGSKKKTAKAASVPSPGGGHLDAGT 1130
            .| :|||:|||..|.|.|..:||.                       .||.|.|           
Human   282 TSITSAAFTLRTQYMKYLYAYECE-----------------------KKALSSP----------- 312

  Fly  1131 TNSTGSSNSQDSFPAPPGSAPNAAIDGYPGYPGGSPYPVASGPQPDYATAGQMQRPPSQNNPQTP 1195
                              :...|||||..          ..|.:|.|:::.....|.:       
Human   313 ------------------AELQAAIDGNR----------REGRRPSYSSSLFGYSPAA------- 342

  Fly  1196 HPGAAAAVAAGDNISVSNP-FEDPIAAGGGPGSGTG-PGPGQGPGPGAASGGAGAVGAVGGGPQP 1258
               |.||.|||....:|.| ...|| .|.|..|||. ..|...|......|        .|.|..
Human   343 ---ATAAAAAGAPALLSPPKIRFPI-LGLGSSSGTNTSSPRISPATTLRKG--------DGAPVT 395

  Fly  1259 HPPPPHS---PHTAAQQAAG 1275
            ..|.|:.   |.|.|.|.||
Human   396 TVPVPNRLAVPVTLASQQAG 415

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
osaNP_001163639.1 BRIGHT 1001..1092 CDD:128777 42/91 (46%)
DUF3518 2191..2451 CDD:288854
ARID3BNP_001294868.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..36
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 53..122 17/63 (27%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 136..179 13/52 (25%)
Interaction with RB1. /evidence=ECO:0000269|PubMed:10446990 203..365 71/234 (30%)
BRIGHT 216..305 CDD:128777 41/88 (47%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 370..397 8/34 (24%)
Interaction with ARID3A. /evidence=ECO:0000269|PubMed:17400556 490..513
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 523..561
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1374
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
32.900

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