Sequence 1: | NP_001163639.1 | Gene: | osa / 42130 | FlyBaseID: | FBgn0261885 | Length: | 2716 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_004914686.1 | Gene: | arid1b / 100493908 | XenbaseID: | XB-GENE-1010354 | Length: | 2413 | Species: | Xenopus tropicalis |
Alignment Length: | 2808 | Identity: | 745/2808 - (26%) |
---|---|---|---|
Similarity: | 1031/2808 - (36%) | Gaps: | 846/2808 - (30%) |
- Green bases have known domain annotations that are detailed below.
Fly 46 NNNSNNGSDPSIQQQQQN--VAPHPY------GAP--PPPGSGPGGPPGPDPAAVMH-----YHH 95
Fly 96 LHQQQQQHPPPPHMQQQQHHGGPAPPPPGGAPEHAPGVKEEYTHLPPPHPHPAYGRYHADPNMDP 160
Fly 161 YRYGQPLP------GGKPPQQQQPHPQQQPPQQP----GPGGS-------------------PNR 196
Fly 197 ------------------PPQQRY----IPGQPPQGPTPTLNSLL-----QSSNPPPPPQHRYAN 234
Fly 235 TYDPQQAAASAAAAAA-----AQQQQAG------GPPPPGHGPPPPQ-------------HQPSP 275
Fly 276 Y------GGQQGGWAPPPRPY----SPQL--------------GPSQQYRTPPPTNTS-----RG 311
Fly 312 QSPYP---------------PAHGQNSGSYP-----SSPQQQQQQQQQQQQQAG----------- 345
Fly 346 -------QQPGGPVPGGPPPGTGQQP--PQQNTP--------------------PTSQYSPY--- 378
Fly 379 ------PQRYPTPPGLPAGGSNHRT--AYSTHQYPEPNRPWPGGSSPSPG--------------- 420
Fly 421 SGHPLPPASPHHVPPLQQQPPPPPHVSAGG-----PPPSSSPGHAPSPSPQ-PSQASPSPHQELI 479
Fly 480 GQ------------NSNDSSSGGAHS-GMGSGPPGTPNPQQVMRPTPSPTGSSGSRSMSPAVAQN 531
Fly 532 HPISRPASNQSSSGGPMQQPPVGAGGPPPMPP--------HPGMPGGPPQQQQSQQQQASNSASS 588
Fly 589 ASNSPQQTPPPAPPPNQGMNNMATPPPPPQGAAGGGYPMPPHMHGGYKMGGPGQSPGAQGYPPQQ 653
Fly 654 PQQYPPGNYPPRPQYPPGAYATGPPPPPTSQAGAG-----GANSM-----PSGAQA-GGYPGRGM 707
Fly 708 PNHT-----GQYPPYQWVPPSPQQTVPGGAP-----------GGAMVGNHVQGKGTPPPPVVGGP 756
Fly 757 PPPQGSGSPRPLNYLKQHLQHKGGYGGSPTPPQGPQGYGNGPTGMHPGMPMGPPHHMGPPHGPTN 821
Fly 822 MGPPTSTPPQSQMLQGGQPQGQGASG--GPESGGPEHISQDNGISSS---------GPTGAAGMH 875
Fly 876 AVTSVVTTGPDGTSMDEVSQQSTLSNASAASGEDPQCTTPKSRKNDPY-SQSHLAPPS----TSP 935
Fly 936 HPVVMHPGGGP-----GEEYDMSSPPNWPRPAGSPQVFNHVPVPQEPFRSTITTTKKSDSLCKLY 995
Fly 996 EMDDNPDRRGWLDKLRAFMEERRTPITACPTISKQPLDLYRLYIYVKERGGFVEVTKSKTWKDIA 1060
Fly 1061 GLLGIGASSSAAYTLRKHYTKNLLTFECHFDRGDIDPLPIIQQVEAGSKKKTAKAASVPSPG--- 1122
Fly 1123 ---GGHLDAGTTNSTGSSNSQDSFPAPPGSAPNAAIDGYPGYPGGSPYPVASGPQPDYATAGQMQ 1184
Fly 1185 RPPSQNNPQTPHPGAAAAVAAGDN--ISVSNPFEDPIAAGGGPGSGTGPGPGQGPGPGAASGGAG 1247
Fly 1248 AVGAVGGGPQPHPPPPHSPHTAAQQAAGQHQQQHPQHQHPGLPGPPPPQQQQGQQGQQPPPSVGG 1312
Fly 1313 G--PPPAPQQH--GPGQVPPSPQQHVRPAAGAPYPPGGSGYPTPVSRTPGSPYPSQPGAY---GQ 1370
Fly 1371 YGSSDQYNATGPPGQ----PFGQGPGQYPPQNRNMYPPYGPEGEAPPTGANQYGPYGSRPYSQPP 1431
Fly 1432 PGGPQPPTQTVAGGPPAGGAPGAPPSSAYPTGRPSQQDYYQPPPDQSPQPRRHPD--FIKDSQPY 1494
Fly 1495 PG--YNARPQIYGAWQSGTQQYRPQYPSSPAPQNWGGAPPRGAAPPPGAPHGPPIQQPAGVAQWD 1557
Fly 1558 QHRYPPQQGPPPPPQQQQQPQQQQQQPPYQQVAGPPGQQPPQAPPQ---WAQMN----------- 1608
Fly 1609 PGQTAQSGIAPPGSPLRPPSGPGQQNRMPGMPAQQQQSQQQGGVPQPPPQQASHGGVPSPGLPQV 1673
Fly 1674 GPGGMVKPPYAMPPPPSQGVGQQVGQGPPGGMMSQKPPPMPGQ-------AMQQQPLQQQPPSHQ 1731
Fly 1732 HPHPHQHPQHQHPHQMPPNQTAPGGYGPPGMPGGGAQLVKKELIFPHDSVESTTPVLYRRKRLMK 1796
Fly 1797 ADVCPVDPWRIFMAMRSGLLTECTWALDVLNVLLFDDSTVQFFGISNLPGLLTLLLEHFQKNLAE 1861
Fly 1862 MFDERENEE-----QSALLAEDADDDADSGTVMCEKLRTSGRQPRCVRSISSYNRRRHYENMDRS 1921
Fly 1922 GKDGAGNGSDSEDADEGIDLGQVRVQPNPEERSLLLSFTPNYTMVTRK--GVPVRIQPAENDIFV 1984
Fly 1985 DERQ----KAWDIDTNRLYEQLEPVGSDAWTYGFTEPDPLDGIIDVFKSEIVNIPFARYIRSDKK 2045
Fly 2046 GRKRTELASSSRKPEIKTEENSTEEQTFNKKRRLVSGGSSSSGAHAEGKKSKLTSEEFAQPNAEV 2110
Fly 2111 --------KKEPGTADSDCRPVDMDIEAPQQRLTNGVAPCSSTPAIFDPRTTAKDEARVLQRRRD 2167
Fly 2168 SSFEDECYTRDEASLHLVSESQDSLARRCIALSNIFRNLTFVPGNETVLAKSTRFLAVLGRLLLL 2232
Fly 2233 NHEHLRRTPKTRNYDRE-EDTDFSDSCSSLQGEREWWWDYLITIRENMLVAMANIAGHLELSRYD 2296
Fly 2297 ELIARPLIDGLLHWAVCPSAHGQDPFPSCGPNSVLSPQRLALEALCKLCVTDANVDLVIATPPFS 2361
Fly 2362 RLEKLCAVLTRHLCRNEDQVLREFSVNLLHYLAAADSAMARTVALQSPCISYLVAFIEQAEQTAL 2426
Fly 2427 GVANQHGINYLRENPDSMGTSLDMLRRAAGTLLHLAKHPDNRSLFMQQEQRLLGLVMSHILDQQV 2491
Fly 2492 ALIISRVLYQVSR 2504 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
osa | NP_001163639.1 | BRIGHT | 1001..1092 | CDD:128777 | 43/90 (48%) |
DUF3518 | 2191..2451 | CDD:288854 | 125/260 (48%) | ||
arid1b | XP_004914686.1 | Med15 | 667..>1118 | CDD:312941 | 136/549 (25%) |
ROM1 | 674..>814 | CDD:227709 | 36/148 (24%) | ||
ARID_ARID1B | 1193..1285 | CDD:350641 | 43/91 (47%) | ||
Glutenin_hmw | <1299..>1625 | CDD:367362 | 114/513 (22%) | ||
PABP-1234 | <1502..1630 | CDD:130689 | 47/193 (24%) | ||
BAF250_C | 2103..2359 | CDD:371856 | 125/260 (48%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 244 | 1.000 | Domainoid score | I2157 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 545 | 1.000 | Inparanoid score | I1135 |
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D135670at33208 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0002548 | |
OrthoInspector | 1 | 1.000 | - | - | otm48837 | |
Panther | 1 | 1.100 | - | - | O | PTHR12656 |
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 1 | 1.000 | - | - | X2249 | |
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
7 | 7.160 |