Sequence 1: | NP_001163639.1 | Gene: | osa / 42130 | FlyBaseID: | FBgn0261885 | Length: | 2716 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_002934685.2 | Gene: | arid1a / 100493385 | XenbaseID: | XB-GENE-492490 | Length: | 2053 | Species: | Xenopus tropicalis |
Alignment Length: | 2721 | Identity: | 748/2721 - (27%) |
---|---|---|---|
Similarity: | 1009/2721 - (37%) | Gaps: | 905/2721 - (33%) |
- Green bases have known domain annotations that are detailed below.
Fly 18 APAPAATPPSAGAAPGAATP---PTSGPPTPNNNSNNGSDPSIQQQQQNVAPHPYGAPPPPGSG- 78
Fly 79 --PGGPPGPDPAAVMHYHHLHQQQQQHPPPPHMQQQQHHGG-PAPPPPGGAPEHAPGVKEEYTHL 140
Fly 141 PPPHPHPAYGRYHADPNMDPYRYGQPLPGGKPPQQQQPHPQQQPPQQPGPGGSPNRPPQQRYIPG 205
Fly 206 QPPQGP------TPTLNSLLQSSNP----PP------PPQHRYANTYDPQQAAASAAAAAAAQQ- 253
Fly 254 -QQAGGPPPPGHG------PPPPQHQ-----PSPY----------GGQQGGWAPPPRPYS----- 291
Fly 292 ---------PQLGPSQQY--------RTPPPTNTSRGQSPY-------PPAHGQNSGSYPSSPQQ 332
Fly 333 QQQQQQQQQQQAGQQPGGPVPGGPPPGTGQQPP-------QQNTPPTSQ-YSPYPQ---RYPTP- 385
Fly 386 ---PGLPAGGSNHRTAYSTHQYPEPNR------PWPGGSSPSPGSG----------HPLPPASPH 431
Fly 432 -----HVPPLQQQPPPPPHVSAGGPPPSSSPGHAPSPSPQPSQASPSPHQELIGQNSNDSSSGGA 491
Fly 492 HSGMGSGPPGTPNPQQVMRPTPSPTGSSGSRSMSPAVAQNHPISRPASNQSSSGGPMQQPPVGAG 556
Fly 557 GPPPMPP--------HPGMPGGPPQQQQSQQQQASNSASSASNSPQQTPPPAPPPNQGMNNMATP 613
Fly 614 PPPPQGAAGGGYPMPPHMHGGYKMGGPGQSPGAQGYPPQQPQQYPPGNYPPRPQY---PPGAYAT 675
Fly 676 GPPPPPTSQAGAGGANSMPSGAQAGGYPGRGMPNHTGQYPPYQWVPPSPQQTVPGGAPGGAMVGN 740
Fly 741 HVQG--KGTPPPPVVGGP-PPPQGSGSPRPLNYLKQHLQHKGGYGGSPTPPQGPQGYGNGPTGMH 802
Fly 803 PGMPMGPPHHMGPPHGPTNMGPPTSTPPQSQMLQGGQPQGQG---------ASGGPESGGPEHIS 858
Fly 859 QDNGISSSGPTGAAGMHAVTSVVTTGPDGTSMDEVSQQSTLSNASAASGEDPQCTTPKSRKNDPY 923
Fly 924 SQSHLAPPSTSPHPVVMHPGGGPGEEYDMSSPPNWPRPAGSPQVFNHVPVPQEPFRSTITTTKKS 988
Fly 989 DSLCKLYEMDDNPDRRGWLDKLRAFMEERRTPITACPTISKQPLDLYRLYIYVKERGGFVEVTKS 1053
Fly 1054 KTWKDIAGLLGIGASSSAAYTLRKHYTKNLLTFECHFDRGDIDPLPIIQQVEAGSKKKTAKAASV 1118
Fly 1119 PSPGGGHLDAG--TTNSTGSSNSQ--DSFPAPPGSAPNAAIDGYPGYPGGSP--YPVASGPQPDY 1177
Fly 1178 ATAGQMQRPPSQNNPQTPHPGAAAAVAA-----------GDNISVSNPFEDPIAAGGGPGSGTGP 1231
Fly 1232 GPGQGPGPGAASGGAGAVGAVGGGPQPHPPPPHSPHTAAQQAAGQHQQQHPQHQHPGLPGPPPPQ 1296
Fly 1297 QQQGQQGQQPPPSVGGGPPPAPQQHGPGQVPPSPQQHVRPAAGAPYPPGGSGYPTPVSRTPGSPY 1361
Fly 1362 PSQPGAYGQYGSSDQYNATGPPGQPFGQGPGQYPPQN--RNMYPPYGP-----EGE--APPTGAN 1417
Fly 1418 QYGPYGSRPYSQPPPGGPQPPTQTVAGGPPAGGAPGAPPSSAYPTGRPSQQDYYQPPPDQSPQPR 1482
Fly 1483 RHPDFIKDSQPYPGYNARPQIYGAWQSGTQQYRP------QYPSSPAPQNWGGAPPRGAAPP-PG 1540
Fly 1541 ---APHGPPIQQPAGVAQWD-----QHRYPPQQGPPP-----------PP--------------Q 1572
Fly 1573 QQQQPQQQQQQPPYQQVAGPPGQQPPQAPPQWAQMNPGQTAQSGIAPPGSPLRPPSGPGQQNRMP 1637
Fly 1638 GMPAQQQQSQQQGGVPQPPPQQASHGGVPSPGLPQVGPGGMVKPPYAMPPPPSQGVGQQVGQGPP 1702
Fly 1703 GGMMSQKPPPMPGQAMQQQPLQQQPPSHQHPHPHQHPQHQHPHQMPPNQTAPGGYGPPGMPGGGA 1767
Fly 1768 QLVKKELIFPHDSVESTTPVLYRRKRLMKADVCPVDPWRIFMAMRSGLLTECTWALDVLNVLLFD 1832
Fly 1833 DSTVQFFGISNLPGLLTLLLEHFQKNLAEMFD-ERENE---------------EQSALLAEDAD- 1880
Fly 1881 ---DDADSGTVMCEKLRTSGRQPRCVRSISSYNRRRHYENMDRSGKDGAGNGSDSEDADEGIDLG 1942
Fly 1943 QVRVQPNPEERSLLLSFTPNYTMVTRKG----VPVRIQPAENDIFVDERQKAWDIDTNRLYEQLE 2003
Fly 2004 PVGSDA--WTYGFTEPDPLDGIIDVFKSEIVNIPFARYIRSDKKGRKRTELASSSRKPEIKTEEN 2066
Fly 2067 STEEQTFNKKRRLVSGGSSSSGAHAEGKKSKLTSEEF--AQPNAEVKKEPGTADSDCRPVDMDIE 2129
Fly 2130 APQQRLTNGVAPCSSTPAIFDPRTTAKDEARVLQRRRDSSFEDECYTRDEASLHLVSESQDSLAR 2194
Fly 2195 RCIALSNIFRNLTFVPGNETVLAKSTRFLAVLGRLLLLNHEHLRRTPKTRNYDREEDTDFSDSCS 2259
Fly 2260 SLQGEREWWWDYLITIRENMLVAMANIAGHLELSRYDELIARPLIDGLLHWAVCPSAHGQDPFPS 2324
Fly 2325 CGPNSVLSPQRLALEALCKLCVTDANVDLVIATPPFSRLEKLCAVLTRHLCRNEDQVLREFSVNL 2389
Fly 2390 LHYLAAADSAMARTVALQSPCISYLVAFIE------QAEQTALGVANQHGINYLRENPDSMGTSL 2448
Fly 2449 DMLRRAAGTLLHLAKHPDNRSLFMQQEQRLLGLVMSHILDQQVALIISRVLYQVSR 2504 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
osa | NP_001163639.1 | BRIGHT | 1001..1092 | CDD:128777 | 42/90 (47%) |
DUF3518 | 2191..2451 | CDD:288854 | 130/265 (49%) | ||
arid1a | XP_002934685.2 | PHA03247 | <14..541 | CDD:223021 | 169/633 (27%) |
Med15 | 364..>738 | CDD:312941 | 128/522 (25%) | ||
ARID_ARID1A | 830..922 | CDD:350640 | 42/91 (46%) | ||
PHA03247 | <1207..1452 | CDD:223021 | 87/392 (22%) | ||
BAF250_C | 1744..1999 | CDD:371856 | 130/265 (49%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 143 | 1.000 | Domainoid score | I4619 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 545 | 1.000 | Inparanoid score | I1135 |
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D135670at33208 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0002548 | |
OrthoInspector | 1 | 1.000 | - | - | otm48837 | |
Panther | 1 | 1.100 | - | - | LDO | PTHR12656 |
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R4068 |
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
7 | 7.190 |