DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment osa and arid5a

DIOPT Version :9

Sequence 1:NP_001163639.1 Gene:osa / 42130 FlyBaseID:FBgn0261885 Length:2716 Species:Drosophila melanogaster
Sequence 2:NP_001314703.1 Gene:arid5a / 100462698 ZFINID:ZDB-GENE-100525-3 Length:587 Species:Danio rerio


Alignment Length:834 Identity:160/834 - (19%)
Similarity:246/834 - (29%) Gaps:336/834 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly   984 TTKKSDSLCKLYEMDDN-------PDRRGWLDKLRAFMEERRTPITACPTISKQPLDLYRLYIYV 1041
            |..:.:||......:||       .:.|.::..|..||:||.|||...|.:..:.::|:::|..|
Zfish    32 TNGEMESLTSTNSSEDNSRSDQSESEERTFITNLYCFMKERNTPIERIPHLGFKQINLWKIYKAV 96

  Fly  1042 KERGGFVEVTKSKTWKDIAGLLGIGA--SSSAAYTLRKHYTKNLLTFECHFDRGDID-PLPIIQQ 1103
            :..||:..||..:.||::...|| |:  |:|||...|:||.:.:|.||... ||:.| |||    
Zfish    97 ETLGGYDAVTARRQWKNVYDELG-GSPGSTSAATCTRRHYERLVLPFERQL-RGEEDKPLP---- 155

  Fly  1104 VEAGSKKKTAKAASVPSPGGGHLDAGTTNSTGSSNSQDSFPAPPGSAPNAAIDGYPGYPGGSPYP 1168
                                                    |:.|......:             |
Zfish   156 ----------------------------------------PSKPRKQYKRS-------------P 167

  Fly  1169 VASGPQPDYATAGQMQRPPSQNNPQTPHPGAAAAVAAGDNISVSNPFEDPIAAGGGPGSGTGPGP 1233
            ...|.:|:.....:|:|..|:....:.|                                     
Zfish   168 ENRGSKPESKKKRKMERDESEEKMLSDH------------------------------------- 195

  Fly  1234 GQGPGPGAASGGAGAVGAVGGGPQPHPPPPHSP-----------HTAAQQAAGQHQQQHPQHQ-- 1285
                             ....|...|    |||           ||:.....|...:::|..|  
Zfish   196 -----------------HCDRGRCSH----HSPWLISSDRLDSEHTSTAPVLGMSSRENPLLQTS 239

  Fly  1286 -HPGLPGPPPPQQQQGQQGQQPPPSVGGGPPPAPQQ-HGPGQVPPSPQQHVR---PAAGAPYP-- 1343
             .|.:..|...:::..|.....|.|..||....|.. |    :..|.|.:.|   .:.|:|.|  
Zfish   240 SPPEVISPLEKKKRLAQASLTIPASEDGGELERPSVIH----ISHSSQSNTRGRHSSDGSPVPVS 300

  Fly  1344 -PGGSGYPTPVSRTPGSPYPSQPGAYGQYGSSDQYNATGPPGQPFGQGPGQYPPQNRNMYPPYGP 1407
             |.||     :||:| |||        ...|.|....|..      :.|.:.|........|...
Zfish   301 SPSGS-----LSRSP-SPY--------SVSSEDCIAVTTQ------KSPAKEPENKTATRLPALS 345

  Fly  1408 EGEAPPTGANQYGPYGSRPYSQPPPGGPQPPTQTVAGGPPAGGAPGAPPSSAYPTGRPSQQDYYQ 1472
            ..:|..||.       .:|.|      ..|.|:.:|.               ||  |...:::.|
Zfish   346 TSKAVSTGV-------CKPLS------CYPNTKELAN---------------YP--RLHYREFLQ 380

  Fly  1473 PPPDQSPQPRRHPDFIKDSQ--------PYPGYNARPQIYGAWQSGTQQYRPQYPSSPAPQNWGG 1529
            ....:..| |....:..|.:        |.|.| .:|.    |......:....|..|       
Zfish   381 AGATEKTQ-RSLLAWTSDDKSRLASHRLPLPAY-TKPY----WVPHASSFSKVLPRDP------- 432

  Fly  1530 APPRGAAPPPGAPHGPPIQQPAGVAQWDQHRYPPQQGPPPPPQQQQQPQQQQQQPPYQQVAGPPG 1594
            ..|..:..|...||         ::.:.||..                                 
Zfish   433 CRPMSSLQPSFKPH---------MSSYHQHLL--------------------------------- 455

  Fly  1595 QQPPQAPPQWAQMNPGQTAQSGIAPPGSPLRPPSGPGQQNRMPGMPAQQQQSQQQGGVPQPPPQQ 1659
            ::|.:|  ...:|           |..||:|               ...::.:.:..:|:|.|.|
Zfish   456 KRPDEA--YLKKM-----------PVSSPIR---------------ITDRKEKAKTALPKPLPTQ 492

  Fly  1660 A----SHGG--VP-SPGLPQVGPGGMVKPPYAMP--P---PPSQGVGQQVGQGPPGGMMSQKPPP 1712
            .    .|||  || .|.|.::.....|:...|:|  |   |....:       ||....|...||
Zfish   493 QYLFHPHGGLTVPYQPALERLRGDLTVEQLKALPLQPVLFPTHLSI-------PPAQSHSMHCPP 550

  Fly  1713 M----PGQAMQQQPLQQQPPSHQHPHPHQHPQHQHPHQMPPNQTAPGGYGPPGM 1762
            :    ||.      .:...||:.:|.|..|              ||.||..|.:
Zfish   551 VGTHFPGS------YEAALPSYNYPMPIWH--------------APAGYNMPSL 584

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
osaNP_001163639.1 BRIGHT 1001..1092 CDD:128777 32/92 (35%)
DUF3518 2191..2451 CDD:288854
arid5aNP_001314703.1 BRIGHT 57..148 CDD:128777 32/92 (35%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1374
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.940

Return to query results.
Submit another query.