Sequence 1: | NP_001262679.1 | Gene: | alt / 42127 | FlyBaseID: | FBgn0038535 | Length: | 874 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_077243.2 | Gene: | Rrbp1 / 81910 | MGIID: | 1932395 | Length: | 1464 | Species: | Mus musculus |
Alignment Length: | 966 | Identity: | 221/966 - (22%) |
---|---|---|---|
Similarity: | 401/966 - (41%) | Gaps: | 202/966 - (20%) |
- Green bases have known domain annotations that are detailed below.
Fly 51 GGAATKKPKKKE----------------LKREKKQRQREQQRDVNNEPEPEEAEDYSDGQSEGQG 99
Fly 100 SVAGEEPGLSKQHVEFE------PDAEVLTDQRR----PSSVAEKENQPSGAGKKGKKDKRNGAN 154
Fly 155 NKTAGILVNKNETVAVKPAANAEETPTLNNFETKIPKDVVELKKQE--QKERKEDNNNKQQSQKK 217
Fly 218 IAGGNVSKKEKVVAVE-TEAPVVTKQILK---------------QQQQQQNGSPK--TQHNQANN 264
Fly 265 KTKQQQQNKKQNQKETLTGKDLAHALDKLADHQNQT----------------IGVNALMNVFSRA 313
Fly 314 ELNRSEIQILIDYLLNKQ---QDMPASHSEWSDDICQKLKRQLEEKEKLLAEEQEASIGIQAKLR 375
Fly 376 ELRQEVNTERAQMHARNQAYIDKLQGKEQELAALN-----------QELSSLNDKL-TLERQ--- 425
Fly 426 ----QLTTLRRE------------KQANSQDLVQLQHLQQDLAHKEKCLAEMTAFVNAETQQKNE 474
Fly 475 VIQQQAQQLQALE-----LQREELEARQNNSIFELEQRKQLEAENADLKQELSAVQQTQSELQRV 534
Fly 535 HAAELQELRQNLSVLEARNVALSQQLTQAANSAVQATAAQSEQAQVQTEALAQKQQELSALRSQV 599
Fly 600 GSLTDAHAQQQKQANALQSQLQEAQQRAEQLQAKEQHLQQELQEQREKNNDVRMKNWKLIEALQN 664
Fly 665 AEALTAKTKTNSAQSVGQQHKELQLQQ----QKAVAANGGGSASSAKSEQQRIRDLYQR------ 719
Fly 720 ----LYP--DAV-----KAQSGNALQASFDQW---------LEQVLATHVKQQQDKLRQKLDAEK 764
Fly 765 SEKQSSS---SH--------KSTQSSNSSSSNHNSTHNNISSNNSSSNSQSSSAAEQQELHKQNL 818
Fly 819 QLRECNDKLTQLVTKTTNTLMDLEERAREQDEHWRGIVEQKEQLILTLQQHASNGE 874 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
alt | NP_001262679.1 | SMC_prok_B | <398..694 | CDD:274008 | 83/335 (25%) |
Rrbp1 | NP_077243.2 | Rib_recp_KP_reg | 33..171 | CDD:282899 | |
Tropomyosin | 833..1081 | CDD:278679 | 63/266 (24%) | ||
SPEC | 877..1071 | CDD:295325 | 48/212 (23%) | ||
PRK02224 | 968..>1448 | CDD:179385 | 79/379 (21%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C167849622 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 148 | 1.000 | Inparanoid score | I4381 |
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | LDO | PTHR18939 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
4 | 3.990 |