DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG14325 and Nlrc3

DIOPT Version :10

Sequence 1:NP_650641.2 Gene:CG14325 / 42123 FlyBaseID:FBgn0038531 Length:460 Species:Drosophila melanogaster
Sequence 2:XP_006245896.3 Gene:Nlrc3 / 287070 RGDID:1304902 Length:1090 Species:Rattus norvegicus


Alignment Length:301 Identity:72/301 - (23%)
Similarity:118/301 - (39%) Gaps:71/301 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   193 DYLLSNLPDLRQLR-LSYSTKTVGC-----------------NYQMGCNQLTVRDILHLTKGLSQ 239
            |.|..|    |.|| |.:|:.|:|.                 |..:..|.::...:..|.:.|..
  Rat   797 DALKKN----RSLRELMFSSNTIGDRGAMALAEALKVNQGLENLDLQSNAISNTGVAVLMRALCT 857

  Fly   240 CHELRTFCLHNTKLMPYQLRFLAHSLDKGCHHLT------EMSLLH--------CAVGDAGIRC- 289
            ...|.:..|....:.|...:.||.:|   |.:.|      ..:|||        .|||:   .| 
  Rat   858 NQTLSSLNLRENSISPEGAQALAQAL---CRNTTLKHLDLTANLLHDQGAQAIATAVGE---NCS 916

  Fly   290 ---------FLETCGKESFG-------TLTVLDLTNNKITEEGAYILSRTLR-HVPLEKLVLRLN 337
                     |::.....:.|       |||.|||..|.|.:|||..::..|: :..|..|.|::.
  Rat   917 LTHLHLQWNFIQAGAARALGQALQLNRTLTTLDLQENAIGDEGASSVAGALKVNTTLTALYLQVA 981

  Fly   338 PIQSDG------AAAIFNTLQVMPIKELDLGTCGITETITKLFMMLICQHTSLLEIDLSNNSLGE 396
            .|.|.|      |.|:..||:::.::..|:|..|.......|.:     ::||..::|..||||.
  Rat   982 SIGSQGAQALGEALAVNRTLEILDLRGNDVGVAGAKALANGLKL-----NSSLRRLNLQENSLGM 1041

  Fly   397 DFGKHLMKIISCNKLLERLDLRNTGLSLDMRRKFQEFLLKN 437
            |...::...:|.|..|..::|:...:.....|...:.:.||
  Rat  1042 DGAIYVATALSENHGLHHINLQGNPIGESGARMISQAIEKN 1082

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG14325NP_650641.2 RNA1 <185..434 CDD:444072 70/296 (24%)
leucine-rich repeat 202..239 CDD:275380 11/54 (20%)
leucine-rich repeat 240..271 CDD:275380 7/30 (23%)
leucine-rich repeat 272..301 CDD:275380 10/59 (17%)
leucine-rich repeat 302..326 CDD:275380 11/24 (46%)
leucine-rich repeat 329..353 CDD:275380 10/29 (34%)
leucine-rich repeat 356..383 CDD:275380 4/26 (15%)
leucine-rich repeat 384..407 CDD:275380 7/22 (32%)
Nlrc3XP_006245896.3 NACHT 165..330 CDD:428606
NOD2_WH 420..478 CDD:465501
NLRC4_HD2 480..607 CDD:465499
leucine-rich repeat 664..688 CDD:275380
RNA1 691..1080 CDD:444072 70/297 (24%)
leucine-rich repeat 693..720 CDD:275380
leucine-rich repeat 721..748 CDD:275380
leucine-rich repeat 749..774 CDD:275380
leucine-rich repeat 777..804 CDD:275380 3/10 (30%)
leucine-rich repeat 805..832 CDD:275380 6/26 (23%)
leucine-rich repeat 833..859 CDD:275380 4/25 (16%)
leucine-rich repeat 861..888 CDD:275380 7/29 (24%)
leucine-rich repeat 889..916 CDD:275380 6/29 (21%)
leucine-rich repeat 917..940 CDD:275380 2/22 (9%)
leucine-rich repeat 945..972 CDD:275380 11/26 (42%)
leucine-rich repeat 973..1000 CDD:275380 8/26 (31%)
leucine-rich repeat 1001..1028 CDD:275380 5/31 (16%)
leucine-rich repeat 1029..1056 CDD:275380 9/26 (35%)
leucine-rich repeat 1057..1076 CDD:275380 3/18 (17%)
Blue background indicates that the domain is not in the aligned region.

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