DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG14325 and Nlrc3

DIOPT Version :10

Sequence 1:NP_650641.2 Gene:CG14325 / 42123 FlyBaseID:FBgn0038531 Length:460 Species:Drosophila melanogaster
Sequence 2:XP_011244204.1 Gene:Nlrc3 / 268857 MGIID:2444070 Length:1109 Species:Mus musculus


Alignment Length:276 Identity:71/276 - (25%)
Similarity:116/276 - (42%) Gaps:39/276 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   163 DICAAYINQLEISFLQPAPPTTDANDHIPLDYLLSNLPDL---RQLRLSYS------TKTVG--- 215
            |||:               |..|.:..:....|.|.||.|   :.|||..:      .:.:|   
Mouse   649 DICS---------------PEADFSLCLSQHVLQSLLPQLLYCQSLRLDNNQFQDPVMELLGSVL 698

  Fly   216 ----CNYQ---MGCNQLTVRDILHLTKGLSQCHELRTFCLHNTKLMPYQLRFLAHSLDKGCHHLT 273
                |..:   :..||:..:....|.:.|.....|.|..|.:..:.|...:.||.:| |....||
Mouse   699 SGKDCRIRKISLAENQIGNKGAKALARSLLVNRSLITLDLRSNSIGPPGAKALADAL-KINRTLT 762

  Fly   274 EMSLLHCAVGDAGIRCFLETCGKESFGTLTVLDLTNNKITEEGAYILSRTLR-HVPLEKLVLRLN 337
            .:||....:.|.|:.|..|..  .|..|:::|.|..|.|...||..::..|: :..|:.|:...|
Mouse   763 SLSLQSNVIKDDGVMCVAEAL--VSNQTISMLQLQKNLIGLIGAQQMADALKQNRSLKALMFSSN 825

  Fly   338 PIQSDGAAAIFNTLQVMPIKE-LDLGTCGITETITKLFMMLICQHTSLLEIDLSNNSLGEDFGKH 401
            .|...||.|:...|:|..|.| |||.:..|::....:.|..:|.:.:|..::|..||:..:..:.
Mouse   826 TIGDRGAIALAEALKVNQILENLDLQSNSISDMGVTVLMRALCSNQTLSSLNLRENSISPEGAQA 890

  Fly   402 LMKIISCNKLLERLDL 417
            |.:.:..|..|:.|||
Mouse   891 LTQALCRNNTLKHLDL 906

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG14325NP_650641.2 RNA1 <185..434 CDD:444072 67/254 (26%)
leucine-rich repeat 202..239 CDD:275380 10/55 (18%)
leucine-rich repeat 240..271 CDD:275380 8/30 (27%)
leucine-rich repeat 272..301 CDD:275380 9/28 (32%)
leucine-rich repeat 302..326 CDD:275380 7/24 (29%)
leucine-rich repeat 329..353 CDD:275380 8/23 (35%)
leucine-rich repeat 356..383 CDD:275380 8/27 (30%)
leucine-rich repeat 384..407 CDD:275380 5/22 (23%)
Nlrc3XP_011244204.1 NACHT 28..>776 CDD:444362 32/142 (23%)
NACHT 176..342 CDD:428606
RNA1 <665..952 CDD:444072 66/245 (27%)
leucine-rich repeat 673..701 CDD:275380 5/27 (19%)
leucine-rich repeat 705..730 CDD:275380 4/24 (17%)
leucine-rich repeat 733..760 CDD:275380 8/27 (30%)
leucine-rich repeat 761..788 CDD:275380 9/28 (32%)
leucine-rich repeat 789..816 CDD:275380 7/26 (27%)
leucine-rich repeat 817..840 CDD:275380 7/22 (32%)
leucine-rich repeat 845..872 CDD:275380 7/26 (27%)
leucine-rich repeat 873..900 CDD:275380 6/26 (23%)
leucine-rich repeat 901..928 CDD:275380 4/6 (67%)
leucine-rich repeat 929..949 CDD:275380
LRR_6 954..976 CDD:463907
leucine-rich repeat 957..977 CDD:275380
leucine-rich repeat 985..1012 CDD:275380
leucine-rich repeat 1013..1047 CDD:275380
leucine-rich repeat 1048..1075 CDD:275380
leucine-rich repeat 1076..1095 CDD:275380
Blue background indicates that the domain is not in the aligned region.

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