DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment MEIS2 and ara

DIOPT Version :10

Sequence 1:NP_733775.1 Gene:MEIS2 / 4212 HGNCID:7001 Length:477 Species:Homo sapiens
Sequence 2:NP_524045.2 Gene:ara / 39439 FlyBaseID:FBgn0015904 Length:717 Species:Drosophila melanogaster


Alignment Length:383 Identity:91/383 - (23%)
Similarity:135/383 - (35%) Gaps:101/383 - (26%)


- Green bases have known domain annotations that are detailed below.


Human   177 SCLKGKMPI--DLVIDERDGSSKSDHEELSGSSTNLADHNPSSWRDHDDATSTHSAGTPGPSSGG 239
            ||.:...||  |.|..:...|.:.|...|:.||.:..           .|.|....|||.||:..
  Fly   131 SCCENGRPIMTDPVSGQTVCSCQYDSARLALSSYSRL-----------PAASVGVYGTPYPSTDQ 184

Human   240 HASQS-GDNSS------EQGDGLDNSVASPGTGD-------------DDDP-------------- 270
            :..|| |.:||      ....||.::.|.|..|.             ..||              
  Fly   185 NPYQSIGVDSSAFYSPLSNPYGLKDTGAGPEMGAWTSAGLQPTTGYYSYDPMSAYGGLLVSNSSY 249

Human   271 --DKDKKRQKKRGIFPKVATNIMRAWLFQHLTHPYPSEEQKKQLAQDTGLTILQVNNWFINARRR 333
              ..|...::|.......||  ::|||.:|..:|||::.:|..||..|.:|:.||:.||.|||||
  Fly   250 GASYDLAARRKNATRESTAT--LKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 312

Human   334 IVQ-----------------PMIDQSNRAGFLLDPSV-SQGAA--YSPEGQPMGSFVLDGQQHMG 378
            :.:                 .::....:....|:||. |||:.  ...|.:.....:.:.|:.:|
  Fly   313 LKKENKMTWEPKNRTDDDDDALVSDDEKDKEDLEPSKGSQGSVSLAKDETKEEEDAIDEDQKCLG 377

Human   379 ---IRPAGLQSMPGDYVSQG-------GPMGMSMAQPSYTPPQMTPHPTQLRHGPPMHSYLPSHP 433
               |..||.     .|.|.|       |..|.|...|....|....||...:.| .....||.|.
  Fly   378 QANILRAGF-----GYPSAGSGSGGYPGGGGSSSGHPGGYHPYHHQHPAYYQAG-QQGGMLPFHG 436

Human   434 HHPAMMMHGGPPTHP-----GMTMSAQSPTMLNSVD---------PNVGGQVMDIHAQ 477
            .:..:....|.|.:.     |:.:.|..|.:.:..|         ..:|.|.|.:..|
  Fly   437 ENSKLQTDLGDPKNQLGRDCGVPIPATKPKIWSLADTVGCKTPPPAYMGHQSMPLQQQ 494

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MEIS2NP_733775.1 Required for interaction with PBX1. /evidence=ECO:0000250 71..191 6/15 (40%)
Meis_PKNOX_N 110..194 CDD:465140 6/18 (33%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 193..283 26/125 (21%)
Homeobox_KN 295..333 CDD:428673 17/37 (46%)
Interaction with DNA. /evidence=ECO:0000305|PubMed:26550823, ECO:0000305|Ref.16 299..333 15/33 (45%)
Transcriptional activation domain 340..477 35/163 (21%)
araNP_524045.2 COG5576 <237..>318 CDD:227863 25/82 (30%)
Homeobox_KN 274..312 CDD:428673 17/37 (46%)

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