DRSC/TRiP Functional Genomics Resources

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Protein Alignment sll and bioP

DIOPT Version :10

Sequence 1:NP_524389.1 Gene:sll / 42115 FlyBaseID:FBgn0038524 Length:465 Species:Drosophila melanogaster
Sequence 2:NP_418271.1 Gene:bioP / 948309 ECOCYCID:EG11471 Length:299 Species:Escherichia coli


Alignment Length:221 Identity:41/221 - (18%)
Similarity:72/221 - (32%) Gaps:79/221 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   152 LMISYLTWGVLQEKIMTQNYLNFTGE-SAKFKDSQFLVFSNRLLAFLVALAYLQWQPSPVRHRAP 215
            |:|:.:.|..         ..:|.|| .|...||.|.|.....||.||.|.:|:.:.:       
E. coli     4 LIITTILWAF---------SFSFYGEYLAGHVDSYFAVLVRVGLAALVFLPFLRTRGN------- 52

  Fly   216 LYKYSYASFSNIMSAWFQYEALKFVNFPTQVLAKSCKIIPVMLMGKIMSKAKYESYEYVTALLIS 280
                                :||.|..        ..::..|.:| :|....:.:|.|:|   :|
E. coli    53 --------------------SLKTVGL--------YMLVGAMQLG-VMYMLSFRAYLYLT---VS 85

  Fly   281 LGMIFFMSGSSDSSKASGVTTLTGIFLLSMYMVFDSFTANWQGSLFKSYGMTPLQMMCGVNLF-- 343
            ..::|              |.||.:::..:|.:.......|      .|..:.|..:.|..:.  
E. coli    86 ELLLF--------------TVLTPLYITLIYDIMSKRRLRW------GYAFSALLAVIGAGIIRY 130

  Fly   344 ----SSIFTGASLSMQGGFMDSLAFA 365
                ...:||..|..    :.::.||
E. coli   131 DQVTDHFWTGLLLVQ----LSNITFA 152

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sllNP_524389.1 UAA 144..444 CDD:462479 41/221 (19%)
bioPNP_418271.1 2A78 11..273 CDD:273359 39/214 (18%)

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