DRSC/TRiP Functional Genomics Resources

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Protein Alignment sll and yddG

DIOPT Version :10

Sequence 1:NP_524389.1 Gene:sll / 42115 FlyBaseID:FBgn0038524 Length:465 Species:Drosophila melanogaster
Sequence 2:NP_415990.5 Gene:yddG / 945942 ECOCYCID:EG12713 Length:293 Species:Escherichia coli


Alignment Length:335 Identity:72/335 - (21%)
Similarity:114/335 - (34%) Gaps:136/335 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly   192 RLLAFLVAL-AYLQWQP------------SPVRHRAPLYKYSYASFSNIMSAWFQYEALKF-VNF 242
            |..|.|:.| |.:.|..            .||...|.:|     |.|.::        |.| |.|
E. coli     3 RQKATLIGLIAIVLWSTMVGLIRGVSEGLGPVGGAAAIY-----SLSGLL--------LIFTVGF 54

  Fly   243 PTQVLAKSCKIIP--VMLMGKIMSKAKYESYEYVTAL----------LISLGMIFFMSGSSDSSK 295
            |      ..:.||  .:|.|.::    :.|||...||          .|.:||:.::..|     
E. coli    55 P------RIRQIPKGYLLAGSLL----FVSYEICLALSLGYAATHHQAIEVGMVNYLWPS----- 104

  Fly   296 ASGVTTLTGIFLLSMYMVFDSFTANW---QGSLFKSYGM---------------------TPLQM 336
                  ||.:|.:    :|:....||   .|.|....|:                     :||..
E. coli   105 ------LTILFAI----LFNGQKTNWLIVPGLLLALVGVCWVLGGDNGLHYDEIINNITTSPLSY 159

  Fly   337 M------------C-----------GVNLFSSIFTGASLSMQGGFMDSLAFATEHPKFVFDM-VV 377
            .            |           |:.:| .:.|||||.:       ..|.|..|:.:|.. |:
E. coli   160 FLAFIGAFIWAAYCTVTNKYARGFNGITVF-VLLTGASLWV-------YYFLTPQPEMIFSTPVM 216

  Fly   378 LSVCSAVGQL-FIYHTIDV---FGPVV-------FTIIMTLRQAVAIM---LSCFIYQHSISLLG 428
            :.:.||...| |.|...:|   .|.|.       ||.:::...|..::   ||...:|.::.:.|
E. coli   217 IKLISAAFTLGFAYAAWNVGILHGNVTIMAVGSYFTPVLSSALAAVLLSAPLSFSFWQGALMVCG 281

  Fly   429 IFGVLIVFVA 438
              |.|:.::|
E. coli   282 --GSLLCWLA 289

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sllNP_524389.1 UAA 144..444 CDD:462479 72/335 (21%)
yddGNP_415990.5 PRK11689 2..292 CDD:183277 72/335 (21%)

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