DRSC/TRiP Functional Genomics Resources

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Protein Alignment sll and YMR253C

DIOPT Version :10

Sequence 1:NP_524389.1 Gene:sll / 42115 FlyBaseID:FBgn0038524 Length:465 Species:Drosophila melanogaster
Sequence 2:NP_013980.1 Gene:YMR253C / 855295 SGDID:S000004866 Length:414 Species:Saccharomyces cerevisiae


Alignment Length:352 Identity:64/352 - (18%)
Similarity:131/352 - (37%) Gaps:82/352 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   152 LMISYL--TWGVLQEKIMTQNYLNFTGESAKFKDSQFLVFSNRLLAFLVALAYLQWQPSPVRHRA 214
            |.:||.  :..|:..|:: :|..:......:.|..|.|:. ..::.::..|.|:....|.:.. .
Yeast    74 LTVSYFFNSAMVVSTKVL-ENDPDDIANDRQIKPLQILLV-RMVITYIGTLIYMYINKSTISD-V 135

  Fly   215 PLYKYSYASF------SNIMSAWFQYEALKFVNFPTQVLAKSCKIIPVMLMGKIMSKAKYESYEY 273
            |..|.....:      :.....:..|.:|.::.....||.........:.:..::.:.::...|.
Yeast   136 PFGKPEVRKWLVLRGCTGFFGVFGMYYSLMYLTISDAVLITFLAPSLTIFLSWVILRERFTKVEA 200

  Fly   274 VTALLISLGMIF-----FMSGS---SDSS---------KASGVTTLTGIF-LLSMYMVFDSFTAN 320
            :.:|:..||::.     |:.|:   :|||         |:..:.||.|:: :|.|..|:      
Yeast   201 LGSLISLLGVVLIVRPSFLFGTPELTDSSSQIVESSDPKSRLIATLVGLWGVLGMSCVY------ 259

  Fly   321 WQGSLFKSYGMTPLQMMCGVNLFSSIFTGASLSMQG-GFMDSLAFATEHPKFVFDMVVLSVCSAV 384
               .:.:..|.....:| .|:.||.|  .|.:|..| ..:.|:.|...|.|              
Yeast   260 ---IIIRYIGKRAHAIM-SVSYFSLI--TAIVSFIGINTIPSMKFQIPHSK-------------- 304

  Fly   385 GQLFIYHTIDVFGPVVFTIIMTL----------------RQAVAIMLSCFIYQHSISLLGIFGVL 433
            .|..::..:.|.| .:|.:::|:                :...|:.....:|:|..::....|::
Yeast   305 KQWILFGNLGVSG-FIFQLLLTMGIQRERAGRGSLMTYTQLLYAVFWDVALYKHWPNIWSWIGMI 368

  Fly   434 IVFVAIFLRVYCTQRLRAIRKRAEANK 460
            |:..|         .|..||.||..|:
Yeast   369 IIISA---------TLWVIRIRAANNE 386

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sllNP_524389.1 UAA 144..444 CDD:462479 58/334 (17%)
YMR253CNP_013980.1 RhaT 67..379 CDD:440461 59/343 (17%)

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