DRSC/TRiP Functional Genomics Resources

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Protein Alignment sll and YMD8

DIOPT Version :10

Sequence 1:NP_524389.1 Gene:sll / 42115 FlyBaseID:FBgn0038524 Length:465 Species:Drosophila melanogaster
Sequence 2:NP_013674.1 Gene:YMD8 / 854970 SGDID:S000004502 Length:442 Species:Saccharomyces cerevisiae


Alignment Length:329 Identity:67/329 - (20%)
Similarity:112/329 - (34%) Gaps:89/329 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   146 LWCFGGLMISYLTWGVLQEKIMTQNYLNFTGESAKFKDSQFLVFSNRLLAFLVALAYLQWQPSPV 210
            ||...|:.|          |:..:...|...::..|..|.||.|   ||...||.|         
Yeast    50 LWLLSGIYI----------KLRHKPVKNVLRKNNGFNWSFFLKF---LLPTAVASA--------- 92

  Fly   211 RHRAPLYKYSYASFSNIMSAWFQYEALKFVNFPTQVLAKSCKIIPVMLMGKIMSKAKYESYEYVT 275
                     .....||:.   |||     |......:.||..|..|:|.|.|.   |.|.:.:..
Yeast    93 ---------GDIGLSNVS---FQY-----VPLTIYTIIKSSSIAFVLLFGCIF---KLEKFHWKL 137

  Fly   276 AL-----LISLGMIFFMSGSSDSSKASGVTTLTGIFLLSMYMVFDSFTANWQGSLFKSYGMTPLQ 335
            ||     .:.:.::.|....|.|:|......:.|.||:            ...|..........|
Yeast   138 ALSVIIMFVGVALMVFKPSDSTSTKNDQALVIFGSFLV------------LASSCLSGLRWVYTQ 190

  Fly   336 MMCGVNLFSSIFTGASLSMQGGFMDSLAFATEHPKFVFDMVVLSVCS-------AVGQLFIYHTI 393
            :|...|...: .|.|::....|     |..||:...|.:..|:::.:       ...:....|||
Yeast   191 LMLRNNPIQT-NTAAAVEESDG-----ALFTENEDNVDNEPVVNLANNKMLENFGESKPHPIHTI 249

  Fly   394 DVFGPVV-FTIIMT---LRQAVAIMLSCFIYQHSISLLG----------IFGVLIVFV---AIFL 441
            ....|:: .|:::|   :.:....:.|..|::...|..|          :.|::::.:   |:||
Yeast   250 HQLAPIMGITLLLTSLLVEKPFPGIFSSSIFRLDTSNGGVGTETTVLSIVRGIVLLILPGFAVFL 314

  Fly   442 RVYC 445
            ...|
Yeast   315 LTIC 318

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sllNP_524389.1 UAA 144..444 CDD:462479 66/326 (20%)
YMD8NP_013674.1 TPT_S35C2 77..371 CDD:411044 60/292 (21%)

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