DRSC/TRiP Functional Genomics Resources

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Protein Alignment sll and AT5G59740

DIOPT Version :9

Sequence 1:NP_001247153.1 Gene:sll / 42115 FlyBaseID:FBgn0038524 Length:465 Species:Drosophila melanogaster
Sequence 2:NP_200782.1 Gene:AT5G59740 / 836095 AraportID:AT5G59740 Length:344 Species:Arabidopsis thaliana


Alignment Length:325 Identity:116/325 - (35%)
Similarity:174/325 - (53%) Gaps:18/325 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly   146 LW----CFGGLMISYLTWGVLQEKIMTQNYLNFTGESAK-FKDSQFLVFSNRLLAFLVALAYLQW 205
            ||    ...|:|.:.:.:||||||||...|    |.:.: ||.|.||||.|||....|:...|..
plant    16 LWKGVFAVSGIMSTLVIYGVLQEKIMRVPY----GVNKEFFKHSLFLVFCNRLTTSAVSAGALLA 76

  Fly   206 QPSPVRHRAPLYKYSYASFSNIMSAWFQYEALKFVNFPTQVLAKSCKIIPVMLMGKIMSKAKYES 270
            ....:...||:|||...|.:||::...||||||:|:||.|.|||..|:||||:.|.::.:.||:.
plant    77 SKKVLDPVAPVYKYCLISVTNILTTTCQYEALKYVSFPVQTLAKCAKMIPVMVWGTLIMQKKYKG 141

  Fly   271 YEYVTALLISLG---MIFFMSGSSDSSKASG-VTTLTGIFLLSMYMVFDSFTANWQGSLFKSYGM 331
            ::|:.|.|::||   .|.|.:|...|....| ..|:.|:.|::.|:.||.||:.:|..|||.|.|
plant   142 FDYLVAFLVTLGCSVFILFPAGDDVSPYNKGRENTVWGVSLMAGYLGFDGFTSTFQDKLFKGYNM 206

  Fly   332 TPLQMMCGVNLFSSIFTGASLSMQGGFMDSLAFATEHPKFVFDMVVLSVCSAVGQLFIYHTIDVF 396
            .....:....|.|.:.:...|.:||..:.::.|.:.|...:.|:.:||..:...|.||.:||..|
plant   207 EIHNQIFYTTLCSCVLSFTGLILQGHLLPAVDFVSLHRDCLLDIALLSTVATASQFFISYTIRTF 271

  Fly   397 GPVVFTIIMTLRQAVAIMLSCFIYQHSISLLGIFGVLIVFVAIFLRVYCTQRLRAIRKRAEANKP 461
            |.:.|..|||.||..:|||||..:.|.:|.....|.:|||.:::     .:.|...:|.::...|
plant   272 GALTFAAIMTTRQLASIMLSCIWFSHPLSWEQCIGSVIVFGSLY-----AKNLLNNKKNSQTQPP 331

  Fly   462  461
            plant   332  331

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sllNP_001247153.1 UAA 144..444 CDD:285625 113/306 (37%)
AT5G59740NP_200782.1 UAA 18..321 CDD:312076 112/311 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 193 1.000 Domainoid score I926
eggNOG 1 0.900 - - E1_COG0697
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H24504
Inparanoid 1 1.050 194 1.000 Inparanoid score I1356
OMA 1 1.010 - - QHG54403
OrthoDB 1 1.010 - - D820879at2759
OrthoFinder 1 1.000 - - FOG0005467
OrthoInspector 1 1.000 - - otm3006
orthoMCL 1 0.900 - - OOG6_105624
Panther 1 1.100 - - LDO PTHR10778
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X3887
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1514.840

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