DRSC/TRiP Functional Genomics Resources

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Protein Alignment sll and UTR5

DIOPT Version :9

Sequence 1:NP_001247153.1 Gene:sll / 42115 FlyBaseID:FBgn0038524 Length:465 Species:Drosophila melanogaster
Sequence 2:NP_190204.2 Gene:UTR5 / 823761 AraportID:AT3G46180 Length:347 Species:Arabidopsis thaliana


Alignment Length:335 Identity:121/335 - (36%)
Similarity:183/335 - (54%) Gaps:22/335 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly   139 SQEAVQLLW----CFGGLMISYLTWGVLQEKIMTQNYLNFTG-ESAKFKDSQFLVFSNRLLAFLV 198
            ::|..:.||    ...|:|::.:.:|:||||||...|    | :...||.|.||||.|||....|
plant    10 AKEKKKKLWKAVFAISGIMLTLVIYGLLQEKIMRVPY----GLKKEYFKHSLFLVFCNRLTTSAV 70

  Fly   199 ALAYLQWQPSPVRHRAPLYKYSYASFSNIMSAWFQYEALKFVNFPTQVLAKSCKIIPVMLMGKIM 263
            :.|.|......:...||:|||...|.:||::...||||||:|:||.|.|||..|:||||:.|.::
plant    71 SAAALLASKKVLDPVAPVYKYCLISVTNILTTTCQYEALKYVSFPVQTLAKCAKMIPVMVWGTLI 135

  Fly   264 SKAKYESYEYVTALLISLG---MIFFMSGSSDSSKASG-VTTLTGIFLLSMYMVFDSFTANWQGS 324
            .:.||..::|:.|.|::||   .|.|.:|...|....| ..|:.|:.|:..|:.||.||:.:|..
plant   136 MQKKYRGFDYLVAFLVTLGCSVFILFPAGDDISPYNKGRENTVWGVSLMVGYLGFDGFTSTFQDK 200

  Fly   325 LFKSYGMTPLQMMCGVNLFSSIFTGASLSMQGGFMDSLAFATEHPKFVFDMVVLSVCSAVGQLFI 389
            |||.|.|.....:....:.|||.:...|.:||..:.::.|.:.|...:||:.:||..:...|.||
plant   201 LFKGYNMEIHNQIFYTTICSSILSFTGLILQGHLLPAVDFVSRHRDCLFDIALLSTVATASQFFI 265

  Fly   390 YHTIDVFGPVVFTIIMTLRQAVAIMLSCFIYQHSISLLGIFGVLIVFVAIFLRVYCTQRLRAIRK 454
            .:||..||.:.|..|||.||..:|||||..:.|.:|.....|.:|||.:::.:.:       ::|
plant   266 SYTIRTFGALTFAAIMTTRQLASIMLSCIWFSHPLSWEQCIGSVIVFGSLYAKTF-------VKK 323

  Fly   455 RAEANKPKMA 464
            ::|  ||..|
plant   324 KSE--KPPAA 331

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sllNP_001247153.1 UAA 144..444 CDD:285625 115/308 (37%)
UTR5NP_190204.2 UAA 21..322 CDD:312076 113/311 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 193 1.000 Domainoid score I926
eggNOG 1 0.900 - - E1_COG0697
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H24504
Inparanoid 1 1.050 194 1.000 Inparanoid score I1356
OMA 1 1.010 - - QHG54403
OrthoDB 1 1.010 - - D820879at2759
OrthoFinder 1 1.000 - - FOG0005467
OrthoInspector 1 1.000 - - otm3006
orthoMCL 1 0.900 - - OOG6_105624
Panther 1 1.100 - - O PTHR10778
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X3887
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1514.840

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