DRSC/TRiP Functional Genomics Resources

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Protein Alignment sll and AT3G07080

DIOPT Version :10

Sequence 1:NP_524389.1 Gene:sll / 42115 FlyBaseID:FBgn0038524 Length:465 Species:Drosophila melanogaster
Sequence 2:NP_187364.1 Gene:AT3G07080 / 819894 AraportID:AT3G07080 Length:438 Species:Arabidopsis thaliana


Alignment Length:272 Identity:52/272 - (19%)
Similarity:89/272 - (32%) Gaps:85/272 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   231 WFQYE-----ALKFVNFPTQVLAKSCKIIPVMLMGKIMSKAKYESYEYVTALLISLGMIFFMSGS 290
            ||..:     :||:....:..:..|...:...|:..|....|:...:..:.||...|.|....|.
plant   174 WFLAQLTFNVSLKYTTVTSNTILSSASSLFTFLVSLIFLGEKFTWLKLFSVLLCMSGTIIVSMGD 238

  Fly   291 SDS-SKASGVTTLTGIFL----LSMYMVF---------DSFTANWQGSLFKSYGMTPLQMMCGVN 341
            |:| |.|.....|.|..|    .::|.|:         |....|.:.|:.:..|...|     .|
plant   239 SESKSNAVAKNPLLGDILSLVSAALYAVYITLIRKKLPDDDERNGRVSMAQFLGFLGL-----FN 298

  Fly   342 LFSSIFTGASLSMQGGFMDSLAFATEHPKFVFDMVVLSVCSAVGQLFIYHTIDVFGPVV------ 400
            .|  ||...:|.:.         .|:..:|          :|:       |:..||.||      
plant   299 FF--IFLPPALILN---------FTKRERF----------NAL-------TLKQFGLVVGKGLLD 335

  Fly   401 ---------------FTIIMTLRQAVAIMLSCFIYQHSIS--------LLGIFGVLIVFVAIFL- 441
                           .|.:.|....:.:.|:..:  .|:|        .:|...|::.|..|.: 
plant   336 NVLSDYLWAKAVLLTTTTVATAGLTIQVPLAAIV--DSLSGNKPSFTDYIGAAAVMVGFAGINIP 398

  Fly   442 -RVYCTQRLRAI 452
             .::|..:..||
plant   399 SEMFCKSKETAI 410

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sllNP_524389.1 UAA 144..444 CDD:462479 49/262 (19%)
AT3G07080NP_187364.1 RhaT <175..399 CDD:440461 48/258 (19%)

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