DRSC/TRiP Functional Genomics Resources

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Protein Alignment sll and meigo

DIOPT Version :10

Sequence 1:NP_524389.1 Gene:sll / 42115 FlyBaseID:FBgn0038524 Length:465 Species:Drosophila melanogaster
Sequence 2:NP_650949.1 Gene:meigo / 42510 FlyBaseID:FBgn0250820 Length:338 Species:Drosophila melanogaster


Alignment Length:319 Identity:81/319 - (25%)
Similarity:147/319 - (46%) Gaps:17/319 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly   151 GLMISYLTWGVLQEKIMTQNYLNFTGESA--------KFKDSQFLVFSNRLLAFLVALAYLQWQP 207
            |:.:.|..:|::|||:....|    ||..        :|..:..||:...|..::.|...|..:|
  Fly    15 GIFVCYFLYGIVQEKLTRGRY----GEEVQTDGSVGERFTYALALVWVQCLCNYVFAKVLLTIRP 75

  Fly   208 SPVRHRAPLYKYSYASFSNIMSAWFQYEALKFVNFPTQVLAKSCKIIPVMLMGKIMSKAKYESYE 272
            .. ........|...|.:.:::......|:::|.:||.|:.||.|.||||::|.::.:..|....
  Fly    76 QK-EDTTNAGSYVACSLTYLLAMVSTNMAMRWVPYPTAVVGKSAKPIPVMILGVLIGRKSYSWTR 139

  Fly   273 YVTALLISLGMIFFMSGSSDSSKASGVTTLTGIFLLSMYMVFDSFTANWQGSLFKSYGMTPLQMM 337
            |...|.|.||:|.||......|.....|||.|..||.:.:..|..|...|..:..:...:..|||
  Fly   140 YACVLTIVLGVILFMYKEGKVSNLPAETTLLGEVLLFLSLSMDGLTGAVQERIRAASAPSGQQMM 204

  Fly   338 CGVNLFSSIFTGASLSMQGGFMDSLAFATEHPKFVFDMVVLSVCSAVGQLFIYHTIDVFGPVVFT 402
            ..:|.:|::..|.::...|...:.:.|...||:....:.:::||..:||.||:..:..|||:..:
  Fly   205 RAMNFWSTLMLGVAMVFTGEAKEFMYFTIRHPEAWTHLSLIAVCGVLGQFFIFLMVASFGPLACS 269

  Fly   403 IIMTLRQAVAIMLSCFIYQHSISLLGIFGVLIVFVAIFLRVYCTQRLRAIRKRAEANKP 461
            ::.|.|:...::.|..::.:.:......|.::||.|:|:.:...::    ...|.|.||
  Fly   270 VVTTTRKFFTVLCSVLLFGNVLIARQWLGAVLVFAALFVDMLYGKK----APLATAKKP 324

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sllNP_524389.1 UAA 144..444 CDD:462479 77/300 (26%)
meigoNP_650949.1 UAA 8..311 CDD:462479 77/300 (26%)

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