DRSC/TRiP Functional Genomics Resources

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Protein Alignment sll and CG5281

DIOPT Version :10

Sequence 1:NP_524389.1 Gene:sll / 42115 FlyBaseID:FBgn0038524 Length:465 Species:Drosophila melanogaster
Sequence 2:NP_650076.1 Gene:CG5281 / 41375 FlyBaseID:FBgn0037902 Length:347 Species:Drosophila melanogaster


Alignment Length:321 Identity:64/321 - (19%)
Similarity:114/321 - (35%) Gaps:89/321 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   177 ESAKFKDSQFLVFSNRLLAFLVALAYLQWQPSPVRHRAPLYKYSYASFSNIMSAWFQYEALKFVN 241
            |.|.|:      |...||..|..|.|.:....|...|..|....:...:.:|        |.|..
  Fly    67 ELASFR------FVGVLLPALPILIYTRQPVFPEGKRVILLLRCFMGTTGLM--------LSFYA 117

  Fly   242 FPTQVLAKSCKII---PVM--LMGKIMSKAKYESYEYVTALLISLGMI------FFMSGSSDSSK 295
            |....||.:..||   ||.  :..:...|.....:..:|..:..||::      |....:::|..
  Fly   118 FRHMPLADASVIIFSTPVFVAIFARAFLKEPCTLFNVLTINMTLLGVVLITRPPFVFGDTAESED 182

  Fly   296 ASGVTTLTGIFLLSMYMVFDSFTANWQGSLFKSYGMTPLQMMCGVNLFSSIFTGASLSMQGGFMD 360
            .:|.|          |.::....|                       .||...||::.:....:.
  Fly   183 VAGKT----------YDIWGPVAA-----------------------ISSTLFGANVYILLRALK 214

  Fly   361 SLAFATEHPKF--VFDMVVLSVCSAVGQL---------FIYHTIDVF---GPVVFTIIMTLRQA- 410
            :|.|:.....|  :..:..|.||:::|.:         ::...:.||   |.::.|:.:.:.|| 
  Fly   215 NLHFSVIMTNFGTIALVYTLIVCASIGAVCWPSCGRDRWLVVVLGVFSFLGQILLTLSLQIEQAG 279

  Fly   411 -VAI-----MLSCFIYQ--------HSISLLGIFGVL--IVFVAIFLRVYCTQRLRAIRKR 455
             |||     ::..|::|        .:.||:|...|:  :|..|:........|..::|||
  Fly   280 PVAIARCADIVFAFVWQMLFFGETPTAYSLVGAVMVMGSVVLTALKKWAGTLPRESSLRKR 340

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sllNP_524389.1 UAA 144..444 CDD:462479 60/308 (19%)
CG5281NP_650076.1 RhaT 36..326 CDD:440461 60/305 (20%)

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