DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment sll and Papst2

DIOPT Version :10

Sequence 1:NP_524389.1 Gene:sll / 42115 FlyBaseID:FBgn0038524 Length:465 Species:Drosophila melanogaster
Sequence 2:NP_648954.1 Gene:Papst2 / 39914 FlyBaseID:FBgn0036695 Length:396 Species:Drosophila melanogaster


Alignment Length:399 Identity:90/399 - (22%)
Similarity:154/399 - (38%) Gaps:73/399 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   107 ITGNSGYDQLDAGTSTADKDRPAASTAPKR--------TSSQEAVQLLWCFGGLMISYLTWGVLQ 163
            ||.|.|.   .||.|...:.:.:.|.:|..        |......|.|....|:...|:.:|.||
  Fly    19 ITINGGE---SAGNSPPSQRKSSTSESPPELRILCFDLTYYNRTTQFLLSCAGVFFLYILYGYLQ 80

  Fly   164 EKIMTQN----------------YLNFTGESAKFKDSQFLVFSNRLLAFLVALAYLQWQPSPVRH 212
            |.|.|..                |:.|.            :...||..:.::.... |...|...
  Fly    81 ELIFTVEGFKPYGWFLTLVQFGYYIGFG------------LVERRLEGYRISGGSF-WNIEPEPR 132

  Fly   213 RAPLYKYSYASFSNIMSAWFQYEALKFVNFPTQVLAKSCKIIPVMLMGKIMSKAK-YESYEYVTA 276
            ..|:..|...:...:.:......:|.::|:||||:.|.||:||| |:|.|:.:.| |...::..|
  Fly   133 CIPMRTYLILAALTLGTMGLSNSSLGYLNYPTQVIFKCCKLIPV-LVGSILIQGKRYGLLDFAAA 196

  Fly   277 LLISLGMIFFMSGSSDSSKASGVTTLTGIFLLSMYMVFDSFTANWQGS------------LFKSY 329
            ..:.:|:.:|....|..:..   ..|.|:.::|..::.|:...|.|..            :|.||
  Fly   197 TCMCIGLAWFTLADSQMTPN---FNLLGVAMISGALLCDAAIGNVQEKAMREFKAPSSEVVFYSY 258

  Fly   330 GMTPLQMMCGVNLFSSIFTGASLSMQGGFMDSLAFATEHPKFVFDM-VVLSVCSAVGQLFIYHTI 393
            |:            ..::....:.:.|.|....||..|||...|.. .:.|:...:|..|:...:
  Fly   259 GL------------GFVYLFVIMLVTGNFFSGFAFCLEHPVETFGYGFLFSLSGYLGIQFVLALV 311

  Fly   394 DVFGPVVFTIIMTLRQAVAIMLSCFIYQHSISLLGIFGVLIVFVAIFLRVYCTQR---LRAIRKR 455
            ...|..:...:.|.|:||.|..|..::....:|..::..|||.:.|:|.||..:.   |..:|:|
  Fly   312 RSSGAPIAATVTTARKAVTIAFSFVLFSKPFTLQYLWSGLIVVLGIYLNVYSKRNKLTLADVRQR 376

  Fly   456 AEANKPKMA 464
            .:....|:|
  Fly   377 IKQFGAKVA 385

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sllNP_524389.1 UAA 144..444 CDD:462479 73/329 (22%)
Papst2NP_648954.1 UAA 61..364 CDD:462479 75/331 (23%)

Return to query results.
Submit another query.