DRSC/TRiP Functional Genomics Resources

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Protein Alignment sll and Slc35b3

DIOPT Version :10

Sequence 1:NP_524389.1 Gene:sll / 42115 FlyBaseID:FBgn0038524 Length:465 Species:Drosophila melanogaster
Sequence 2:XP_225253.5 Gene:Slc35b3 / 306866 RGDID:1307183 Length:411 Species:Rattus norvegicus


Alignment Length:313 Identity:87/313 - (27%)
Similarity:144/313 - (46%) Gaps:27/313 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly   140 QEAVQLLWCFGGLMISYLTWGVLQEKIMTQN-------YLNFTGESAKFKDSQFLVFSNRLLAFL 197
            ::..|.|.|..|:.:.||.:|.|||.|.:..       ||...         ||..:|   :..|
  Rat    86 KKLTQFLICVAGVFVFYLIYGYLQELIFSMEGFKPYGWYLTLV---------QFAFYS---VFGL 138

  Fly   198 VALAYLQWQPSPVRHRAPLYKYSYASFSNIMSAWFQYEALKFVNFPTQVLAKSCKIIPVMLMGKI 262
            :.|...|    ..|.|.|...|...:|..:.:......:|.::|:||||:.|.||:|||||.|..
  Rat   139 IELQLTQ----DKRRRIPGKTYMIIAFLTVGTMGLSNTSLGYLNYPTQVIFKCCKLIPVMLGGVF 199

  Fly   263 MSKAKYESYEYVTALLISLGMIFFMSGSSDSSKASGVTTLTGIFLLSMYMVFDSFTANWQGSLFK 327
            :...:|...:...|:.:|||:|:|.  .:||:.|... .|||:.|:|:.:..|:...|.|....|
  Rat   200 IQGKRYNLADVSAAVCMSLGLIWFT--LADSTIAPNF-NLTGVMLISLALCADAVIGNVQEKAMK 261

  Fly   328 SYGMTPLQMMCGVNLFSSIFTGASLSMQGGFMDSLAFATEHPKFVFDMVVL-SVCSAVGQLFIYH 391
            .:..:..:|:........::....||...|...:|||.:::|...:....| |:....|..|:..
  Rat   262 LHNASNSEMVLYSYSIGFVYILLGLSCTSGLGPALAFCSKNPVRTYGYAFLFSLTGYFGISFVLA 326

  Fly   392 TIDVFGPVVFTIIMTLRQAVAIMLSCFIYQHSISLLGIFGVLIVFVAIFLRVY 444
            .|.:||.::...:.|.|:|:.|:||...:....:...|:..|:|.:.|||.||
  Rat   327 LIKIFGALLAVTVTTGRKAMTIVLSFLFFAKPFTFQYIWSGLLVVLGIFLNVY 379

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sllNP_524389.1 UAA 144..444 CDD:462479 85/307 (28%)
Slc35b3XP_225253.5 UAA 90..381 CDD:462479 87/309 (28%)

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