DRSC/TRiP Functional Genomics Resources

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Protein Alignment sll and Slc35b1

DIOPT Version :9

Sequence 1:NP_001247153.1 Gene:sll / 42115 FlyBaseID:FBgn0038524 Length:465 Species:Drosophila melanogaster
Sequence 2:NP_954512.1 Gene:Slc35b1 / 287642 RGDID:727783 Length:322 Species:Rattus norvegicus


Alignment Length:315 Identity:101/315 - (32%)
Similarity:161/315 - (51%) Gaps:13/315 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly   133 APKRTSSQEAVQLLWCFGGLMISYLTWGVLQEKIMTQNYLNFTGESAKFKDSQF---LVFSNRLL 194
            |..|:...:.::|..||.|:.:.|..:|:|||||....|    ||..|.:...|   |||...::
  Rat     2 AASRSLVPDRLRLPLCFLGVFVCYFYYGILQEKITRGKY----GEGPKQETFTFALTLVFIQCVI 62

  Fly   195 AFLVALAYLQWQPSPVRHRAPLYKYSYASFSNIMSAWFQYEALKFVNFPTQVLAKSCKIIPVMLM 259
            ..:.|...:|:..:....|...:.|:..|.|.:.:......||:|||:|||||.||||.|||||:
  Rat    63 NAMFAKILIQFFDTARVDRTRTWLYAACSVSYVGAMVSSNSALQFVNYPTQVLGKSCKPIPVMLL 127

  Fly   260 GKIMSKAKYESYEYVTALLISLGMIFFMSGSSDSSKASGVTTLT---GIFLLSMYMVFDSFTANW 321
            |..:.|.||...:|:..|||..|:..||   ....|..|:...|   |..||.:.:..|..|...
  Rat   128 GVTLLKKKYPLAKYLCVLLIVAGVALFM---YKPKKVVGIEEHTVGFGELLLLLSLTLDGLTGVS 189

  Fly   322 QGSLFKSYGMTPLQMMCGVNLFSSIFTGASLSMQGGFMDSLAFATEHPKFVFDMVVLSVCSAVGQ 386
            |..:...|......||..:||:|::..||.:...|...:.|:||..:|..::::::..:.||:||
  Rat   190 QDHMRAHYQTGSNHMMLNINLWSTVLLGAGILFTGELWEFLSFAERYPTIIYNILLFGLTSALGQ 254

  Fly   387 LFIYHTIDVFGPVVFTIIMTLRQAVAIMLSCFIYQHSISLLGIFGVLIVFVAIFL 441
            .||:.|:..|||:..:||.|.|:...|:.|..::.:.||.:...|.::||:.:.|
  Rat   255 SFIFMTVVYFGPLTCSIITTTRKFFTILASVILFANPISSMQWVGTVLVFLGLGL 309

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sllNP_001247153.1 UAA 144..444 CDD:285625 99/304 (33%)
Slc35b1NP_954512.1 UAA 16..309 CDD:285625 97/299 (32%)
EamA <205..309 CDD:304911 32/103 (31%)
Di-lysine motif 318..322
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0697
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54403
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

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