DRSC/TRiP Functional Genomics Resources

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Protein Alignment sll and Slc35b1

DIOPT Version :10

Sequence 1:NP_524389.1 Gene:sll / 42115 FlyBaseID:FBgn0038524 Length:465 Species:Drosophila melanogaster
Sequence 2:NP_954512.1 Gene:Slc35b1 / 287642 RGDID:727783 Length:322 Species:Rattus norvegicus


Alignment Length:315 Identity:101/315 - (32%)
Similarity:161/315 - (51%) Gaps:13/315 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly   133 APKRTSSQEAVQLLWCFGGLMISYLTWGVLQEKIMTQNYLNFTGESAKFKDSQF---LVFSNRLL 194
            |..|:...:.::|..||.|:.:.|..:|:|||||....|    ||..|.:...|   |||...::
  Rat     2 AASRSLVPDRLRLPLCFLGVFVCYFYYGILQEKITRGKY----GEGPKQETFTFALTLVFIQCVI 62

  Fly   195 AFLVALAYLQWQPSPVRHRAPLYKYSYASFSNIMSAWFQYEALKFVNFPTQVLAKSCKIIPVMLM 259
            ..:.|...:|:..:....|...:.|:..|.|.:.:......||:|||:|||||.||||.|||||:
  Rat    63 NAMFAKILIQFFDTARVDRTRTWLYAACSVSYVGAMVSSNSALQFVNYPTQVLGKSCKPIPVMLL 127

  Fly   260 GKIMSKAKYESYEYVTALLISLGMIFFMSGSSDSSKASGVTTLT---GIFLLSMYMVFDSFTANW 321
            |..:.|.||...:|:..|||..|:..||   ....|..|:...|   |..||.:.:..|..|...
  Rat   128 GVTLLKKKYPLAKYLCVLLIVAGVALFM---YKPKKVVGIEEHTVGFGELLLLLSLTLDGLTGVS 189

  Fly   322 QGSLFKSYGMTPLQMMCGVNLFSSIFTGASLSMQGGFMDSLAFATEHPKFVFDMVVLSVCSAVGQ 386
            |..:...|......||..:||:|::..||.:...|...:.|:||..:|..::::::..:.||:||
  Rat   190 QDHMRAHYQTGSNHMMLNINLWSTVLLGAGILFTGELWEFLSFAERYPTIIYNILLFGLTSALGQ 254

  Fly   387 LFIYHTIDVFGPVVFTIIMTLRQAVAIMLSCFIYQHSISLLGIFGVLIVFVAIFL 441
            .||:.|:..|||:..:||.|.|:...|:.|..::.:.||.:...|.::||:.:.|
  Rat   255 SFIFMTVVYFGPLTCSIITTTRKFFTILASVILFANPISSMQWVGTVLVFLGLGL 309

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sllNP_524389.1 UAA 144..444 CDD:462479 99/304 (33%)
Slc35b1NP_954512.1 UAA 16..309 CDD:462479 97/299 (32%)
Di-lysine motif 318..322
Blue background indicates that the domain is not in the aligned region.

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