DRSC/TRiP Functional Genomics Resources

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Protein Alignment sll and pst-1

DIOPT Version :9

Sequence 1:NP_001247153.1 Gene:sll / 42115 FlyBaseID:FBgn0038524 Length:465 Species:Drosophila melanogaster
Sequence 2:NP_741546.3 Gene:pst-1 / 178980 WormBaseID:WBGene00004206 Length:440 Species:Caenorhabditis elegans


Alignment Length:430 Identity:154/430 - (35%)
Similarity:240/430 - (55%) Gaps:21/430 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 DLLRASLGGYYNQDVT---LSQLVESQN---SDYAWFLKLLVNCFGYSCVFVPGFLIYKYVGRIN 89
            |.|....|.|..|.::   :..|.|:::   .:..|.|:|.:...|||.|..|..::..||.|..
 Worm     2 DPLSWGRGWYAIQTISGSVIQYLKEARDKPPDELVWPLRLFLILLGYSTVATPAAILIYYVRRNR 66

  Fly    90 YLERGNKTFLHKAINMCITGNSGYDQLDAGTSTADKDRPAASTAPKRTSSQ---EAVQLLWCFGG 151
            :........:...:.....||..|..:..|...|.|:..:.    .:|.:|   ..:.||:.|.|
 Worm    67 HAFETPYLSIRLLLRSFAVGNPEYQLIPTGEKQARKENDSI----PQTRAQCINVIILLLFFFSG 127

  Fly   152 LMISYLTWGVLQEKIMTQNYLNFTGESA--KFKDSQFLVFSNRLLAFLVALAYL--QWQPSPVRH 212
            :.::.:..|||||:|:|:.|........  ||.::|||:|.||::|.:::|..|  .|...| .|
 Worm   128 IQVTLVAMGVLQERIITRGYRRSDQLEVEDKFGETQFLIFCNRIVALVLSLMILAKDWTKQP-PH 191

  Fly   213 RAPLYKYSYASFSNIMSAWFQYEALKFVNFPTQVLAKSCKIIPVMLMGKIMSKAKYESYEYVTAL 277
            ..|||.:||.||||.:|:|.||||||:|:||||.:.|:.|::..||||:::...:|..:||....
 Worm   192 VPPLYVHSYTSFSNTISSWCQYEALKYVSFPTQTICKASKVVVTMLMGRLVRGQRYSWFEYGCGC 256

  Fly   278 LISLGMIFFMSGSSDSSKASGV--TTLTGIFLLSMYMVFDSFTANWQGSLFKSY-GMTPLQMMCG 339
            .|:.|...|:..||.....|.:  |:.:|:.|::.|::||:||.|||.:||.:. .::..|||.|
 Worm   257 TIAFGASLFLLSSSSKGAGSTITYTSFSGMILMAGYLLFDAFTLNWQKALFDTKPKVSKYQMMFG 321

  Fly   340 VNLFSSIFTGASLSMQGGFMDSLAFATEHPKFVFDMVVLSVCSAVGQLFIYHTIDVFGPVVFTII 404
            ||.||:|....||..||....|:.|..||..|..|:.:||:..|:||:|||.||:.|||:||.:|
 Worm   322 VNFFSAILCAVSLIEQGTLWSSIKFGAEHVDFSRDVFLLSLSGAIGQIFIYSTIERFGPIVFAVI 386

  Fly   405 MTLRQAVAIMLSCFIYQHSISLLGIFGVLIVFVAIFLRVY 444
            ||:||.::|:||..:|.|.::.|...|.:|||.|||:.::
 Worm   387 MTIRQMLSIVLSTIMYGHELTFLAAIGFMIVFAAIFVDIH 426

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sllNP_001247153.1 UAA 144..444 CDD:285625 128/306 (42%)
pst-1NP_741546.3 UAA 121..423 CDD:285625 127/302 (42%)
EamA 312..423 CDD:304911 51/110 (46%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160156150
Domainoid 1 1.000 244 1.000 Domainoid score I1221
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H24504
Inparanoid 1 1.050 262 1.000 Inparanoid score I1901
Isobase 1 0.950 - 0 Normalized mean entropy S2363
OMA 1 1.010 - - QHG54403
OrthoDB 1 1.010 - - D334764at33208
OrthoFinder 1 1.000 - - FOG0005467
OrthoInspector 1 1.000 - - oto20648
orthoMCL 1 0.900 - - OOG6_105624
Panther 1 1.100 - - LDO PTHR10778
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R581
SonicParanoid 1 1.000 - - X3887
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1514.890

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