DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment sll and Slc35b3

DIOPT Version :9

Sequence 1:NP_001247153.1 Gene:sll / 42115 FlyBaseID:FBgn0038524 Length:465 Species:Drosophila melanogaster
Sequence 2:XP_006516590.1 Gene:Slc35b3 / 108652 MGIID:1913978 Length:444 Species:Mus musculus


Alignment Length:364 Identity:93/364 - (25%)
Similarity:158/364 - (43%) Gaps:65/364 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   144 QLLWCFGGLMISYLTWGVLQEKIMTQN-------YLNFTGESAKFKDSQFLVFSNRLLAFLVALA 201
            |.|.|..|:.:.||.:|.|||.|.:..       ||...         ||        ||.....
Mouse    92 QFLICVAGVFVFYLIYGYLQELIFSVEGFKPYGWYLTLV---------QF--------AFYSVFG 139

  Fly   202 YLQWQPSPVRHRAP---------LYKYSYASFSNIMSAWF------------------------- 232
            .::.|.:..|.|:|         :|:|.::|.|.  :.||                         
Mouse   140 LIELQLTQDRRRSPVSPSVSFFSVYEYRWSSLSG--TPWFITFIPRIPGKTYMLIAFLTVGTMGL 202

  Fly   233 QYEALKFVNFPTQVLAKSCKIIPVMLMGKIMSKAKYESYEYVTALLISLGMIFFMSGSSDSSKAS 297
            ...:|.::|:||||:.|.||:|||||.|..:...:|...:...|:.:|||:|:|.  .:||:.|.
Mouse   203 SNTSLGYLNYPTQVIFKCCKLIPVMLGGVFIQGKRYNLADVSAAVCMSLGLIWFT--LADSTIAP 265

  Fly   298 GVTTLTGIFLLSMYMVFDSFTANWQGSLFKSYGMTPLQMMCGVNLFSSIFTGASLSMQGGFMDSL 362
            .. .|||:.|:|:.:..|:...|.|....|.:..:..:|:........::....||...|...::
Mouse   266 NF-NLTGVMLISLALCADAVIGNVQEKAMKLHNASNSEMVLYSYSIGFVYILLGLSCTSGLGPAV 329

  Fly   363 AFATEHPKFVFDMVVL-SVCSAVGQLFIYHTIDVFGPVVFTIIMTLRQAVAIMLSCFIYQHSISL 426
            ||.:::|...:....| |:....|..|:...|.:||.::...:.|.|:|:.::||...:....:.
Mouse   330 AFCSKNPVGTYGYAFLFSLTGYFGISFVLALIKIFGALLAVTVTTGRKAMTVVLSFLFFAKPFTF 394

  Fly   427 LGIFGVLIVFVAIFLRVYCTQRLRAIRKRAEANKPKMAV 465
            ..|:..|:|.:.|||.|| ::.:..||..:..|..|.|:
Mouse   395 QYIWSGLLVVLGIFLNVY-SKNMDKIRLPSVYNMIKKAM 432

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sllNP_001247153.1 UAA 144..444 CDD:285625 86/341 (25%)
Slc35b3XP_006516590.1 UAA 92..414 CDD:312076 88/344 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0697
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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