DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Sgs5bis and Sgs5

DIOPT Version :9

Sequence 1:NP_732246.1 Gene:Sgs5bis / 42113 FlyBaseID:FBgn0038523 Length:142 Species:Drosophila melanogaster
Sequence 2:NP_524388.1 Gene:Sgs5 / 42114 FlyBaseID:FBgn0003375 Length:163 Species:Drosophila melanogaster


Alignment Length:160 Identity:75/160 - (46%)
Similarity:110/160 - (68%) Gaps:18/160 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MFNIILLATILV--------SVAQATIIIKP------ENPVEETT----KCQIYWREHAWALEDC 47
            ||||.||..:|.        :|.:..|..||      |:.::.:|    ||.||:|.:.|||:||
  Fly     1 MFNIKLLLLLLAVSWFHHGQAVQETKIEEKPVSEPEIESEIKNSTSVPSKCNIYYRNYQWALQDC 65

  Fly    48 VCRVFQNGCLLNEESNRREKAGKTPLIPVTEQVCQKFIKRKCFLGWPVLAKFPIPSPCGCNGKQG 112
            |||.|||.||:..||::|:|.|::|.:||||::|:.||.:||.:|:||:|:||||:|||||.|.|
  Fly    66 VCRCFQNECLMQIESDQRKKEGRSPFVPVTEELCRSFICKKCSVGFPVVAEFPIPAPCGCNRKPG 130

  Fly   113 SLEIKKFLSLCELQKYAAECNKPYISYSKC 142
            |:..::|.|||.|.|::||.:||:::||.|
  Fly   131 SIATERFYSLCHLLKFSAENSKPFLTYSYC 160



Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45443971
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0014372
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.930

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