DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hmx and YOX1

DIOPT Version :10

Sequence 1:NP_001262674.1 Gene:Hmx / 42110 FlyBaseID:FBgn0264005 Length:718 Species:Drosophila melanogaster
Sequence 2:NP_013685.1 Gene:YOX1 / 854981 SGDID:S000004489 Length:385 Species:Saccharomyces cerevisiae


Alignment Length:390 Identity:86/390 - (22%)
Similarity:146/390 - (37%) Gaps:80/390 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   316 SSTNTTENPPSPTSMSPNNNNNNS----------NTTASSNQASKSPSHHPLHPLYHPLGSQQQQ 370
            |.|..:.:|.||:..:|..:.:..          ||:.:..::.:|...|.:..|:.  .|....
Yeast    16 SGTEISSSPVSPSFTNPRTSFHLDDRGTIKLPPLNTSINRPRSVESALRHTVTSLHE--NSSAYG 78

  Fly   371 QQQQQHQQHP---QQQQHPQQQQQQHPHQPTTPTSSSSSGGGSSLTHHPHPHLT--GSHGGYLLP 430
            ....:|.|..   ..|.:..|:.....|:....|..:|.....|::...:..||  .:....::|
Yeast    79 DDMLKHTQSDSALSSQLNSSQETVDESHENLLLTPLNSKKRDYSVSSKKNDILTPLSAAKSIIIP 143

  Fly   431 SSSNESDE------EGEEIIEEDDGTDGPSDSSSPHGDGNSKRKKKTRTVFSRAQVFQLESTFDL 489
            |:|.|...      ..:|...:.:    |...::|     ..|:|:.||......:.|.|  |:.
Yeast   144 SASKEKRRAFAFITHSQETFPKKE----PKIDNAP-----LARRKRRRTSSQELSILQAE--FEK 197

  Fly   490 KRYLSSSERAGLAASLRLTETQVKIWFQNRRNKWKRQLAAELEAANMANM---------AHAAQR 545
            ....|..:|..||.|..:||..|:|||||:|...|||..|..::..:...         .||...
Yeast   198 CPAPSKEKRIELAESCHMTEKAVQIWFQNKRQAVKRQRIATSKSTTIIQTVSPPSPPLDVHATPL 262

  Fly   546 LVRVPV-LYHDGT----TAGFVP----PPPPHHHPMQYYAAARNTSPP------------RPPLS 589
            ..||.. :..||:    ::...|    ||.|||      :..|.:|.|            .|...
Yeast   263 ASRVKADILRDGSSCSRSSSSSPLENTPPRPHH------SLNRRSSTPSIKRSQALTFHLNPQKK 321

  Fly   590 SLVXGVGCLATAPMSLL-KPPNSMAHPPH--PQP---PPPAPLHMQQRSFLGCEQLTETDMDSDS 648
            :|.     :.|:|.|.: |..||:.|.|.  .:|   |..:|...::..|...:|....|:|.::
Yeast   322 TLTP----VKTSPNSRVNKLINSIDHSPSKAKRPVSNPSGSPKRKRKFGFKIVDQQPLKDLDPNA 382

  Fly   649  648
            Yeast   383  382

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HmxNP_001262674.1 Homeodomain 469..525 CDD:459649 20/55 (36%)
YOX1NP_013685.1 COG5576 126..267 CDD:227863 37/151 (25%)

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