DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hmx and YOX1

DIOPT Version :9

Sequence 1:NP_001262674.1 Gene:Hmx / 42110 FlyBaseID:FBgn0264005 Length:718 Species:Drosophila melanogaster
Sequence 2:NP_013685.1 Gene:YOX1 / 854981 SGDID:S000004489 Length:385 Species:Saccharomyces cerevisiae


Alignment Length:390 Identity:86/390 - (22%)
Similarity:146/390 - (37%) Gaps:80/390 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   316 SSTNTTENPPSPTSMSPNNNNNNS----------NTTASSNQASKSPSHHPLHPLYHPLGSQQQQ 370
            |.|..:.:|.||:..:|..:.:..          ||:.:..::.:|...|.:..|:.  .|....
Yeast    16 SGTEISSSPVSPSFTNPRTSFHLDDRGTIKLPPLNTSINRPRSVESALRHTVTSLHE--NSSAYG 78

  Fly   371 QQQQQHQQHP---QQQQHPQQQQQQHPHQPTTPTSSSSSGGGSSLTHHPHPHLT--GSHGGYLLP 430
            ....:|.|..   ..|.:..|:.....|:....|..:|.....|::...:..||  .:....::|
Yeast    79 DDMLKHTQSDSALSSQLNSSQETVDESHENLLLTPLNSKKRDYSVSSKKNDILTPLSAAKSIIIP 143

  Fly   431 SSSNESDE------EGEEIIEEDDGTDGPSDSSSPHGDGNSKRKKKTRTVFSRAQVFQLESTFDL 489
            |:|.|...      ..:|...:.:    |...::|     ..|:|:.||......:.|.|  |:.
Yeast   144 SASKEKRRAFAFITHSQETFPKKE----PKIDNAP-----LARRKRRRTSSQELSILQAE--FEK 197

  Fly   490 KRYLSSSERAGLAASLRLTETQVKIWFQNRRNKWKRQLAAELEAANMANM---------AHAAQR 545
            ....|..:|..||.|..:||..|:|||||:|...|||..|..::..:...         .||...
Yeast   198 CPAPSKEKRIELAESCHMTEKAVQIWFQNKRQAVKRQRIATSKSTTIIQTVSPPSPPLDVHATPL 262

  Fly   546 LVRVPV-LYHDGT----TAGFVP----PPPPHHHPMQYYAAARNTSPP------------RPPLS 589
            ..||.. :..||:    ::...|    ||.|||      :..|.:|.|            .|...
Yeast   263 ASRVKADILRDGSSCSRSSSSSPLENTPPRPHH------SLNRRSSTPSIKRSQALTFHLNPQKK 321

  Fly   590 SLVXGVGCLATAPMSLL-KPPNSMAHPPH--PQP---PPPAPLHMQQRSFLGCEQLTETDMDSDS 648
            :|..    :.|:|.|.: |..||:.|.|.  .:|   |..:|...::..|...:|....|:|.::
Yeast   322 TLTP----VKTSPNSRVNKLINSIDHSPSKAKRPVSNPSGSPKRKRKFGFKIVDQQPLKDLDPNA 382

  Fly   649  648
            Yeast   383  382

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HmxNP_001262674.1 Homeobox 471..524 CDD:278475 19/52 (37%)
YOX1NP_013685.1 COG5576 126..267 CDD:227863 37/151 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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