DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hmx and hmx3

DIOPT Version :9

Sequence 1:NP_001262674.1 Gene:Hmx / 42110 FlyBaseID:FBgn0264005 Length:718 Species:Drosophila melanogaster
Sequence 2:NP_001072829.1 Gene:hmx3 / 780290 XenbaseID:XB-GENE-483776 Length:306 Species:Xenopus tropicalis


Alignment Length:382 Identity:135/382 - (35%)
Similarity:168/382 - (43%) Gaps:123/382 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   234 FSISSILSRSEPAKK---------------NGAAGLITPIPQLPQPGAGGPQDAAMLSRLGFISQ 283
            |||.|:|: .||::.               :|||..::|:..|..|            ||...:|
 Frog    18 FSIKSLLT-CEPSRAVRPHKALFTPIKGALDGAAFALSPLTDLTFP------------RLEIPAQ 69

  Fly   284 WGALAGRYAALCPPGWPWAPQRLPF--HSPTHDSSSTNTTENPPSPTSMSPNNNNNNSNTTASSN 346
            ..||...|... .|.| |....|..  |:|..:....:....|.||.|                 
 Frog    70 RFALPAHYLER-SPAW-WYSYTLAHGGHTPRTEVPDKSLLLGPTSPVS----------------- 115

  Fly   347 QASKSPSHHPLHPLYHPLGSQQQQQQQQQHQQHPQQQQHPQQQQQQHPHQPTTPTSSSSSGGGSS 411
             ..:..|..|:|||...|.::..:.:.                                      
 Frog   116 -GGERDSPEPIHPLKAELEAKDSESKS-------------------------------------- 141

  Fly   412 LTHHPHPHLTGSHGGYLLPSSSNESDEEGEEIIEEDDGTDGPSDSSSPHGDGNSKRKKKTRTVFS 476
                              |......:.|.||..::|.|.|......||  |....||||||||||
 Frog   142 ------------------PEEIILEESEPEEGKKDDSGEDWKKREESP--DKKPCRKKKTRTVFS 186

  Fly   477 RAQVFQLESTFDLKRYLSSSERAGLAASLRLTETQVKIWFQNRRNKWKRQLAAELEAANMANMAH 541
            |:||||||||||:||||||||||||||||.|||||||||||||||||||||||||||||:::.  
 Frog   187 RSQVFQLESTFDMKRYLSSSERAGLAASLHLTETQVKIWFQNRRNKWKRQLAAELEAANLSHA-- 249

  Fly   542 AAQRLVRVPVLYHD-------GTTAGFVPPPPP---HHHPMQYYAAARNTSPP--RP 586
            ||||:||||:|||:       .::|..||...|   ..||: ||:....||.|  ||
 Frog   250 AAQRIVRVPILYHENSSSAESASSAANVPVSQPLLTFPHPV-YYSHPVVTSVPLLRP 305

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HmxNP_001262674.1 Homeobox 471..524 CDD:278475 49/52 (94%)
hmx3NP_001072829.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 95..181 25/161 (16%)
Homeobox 181..235 CDD:365835 50/53 (94%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 111 1.000 Domainoid score I6173
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0003349
OrthoInspector 1 1.000 - - otm47460
Panther 1 1.100 - - O PTHR46110
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4603
SonicParanoid 1 1.000 - - X983
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
66.130

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