DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hmx and pb

DIOPT Version :10

Sequence 1:NP_001262674.1 Gene:Hmx / 42110 FlyBaseID:FBgn0264005 Length:718 Species:Drosophila melanogaster
Sequence 2:XP_061500970.1 Gene:pb / 5667717 VectorBaseID:AGAMI1_011971 Length:790 Species:Anopheles gambiae


Alignment Length:195 Identity:60/195 - (30%)
Similarity:85/195 - (43%) Gaps:23/195 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   341 TTASSNQASKSPSHHPLHPLYHPLGSQQQQQQQQQHQQHPQQQQHPQQQQQQHPH-QPTTPTSSS 404
            ||..:.|.|...|       ..|||:|...|||...||......:..|.:....: ||:.     
Mosquito    74 TTRVATQLSVITS-------VEPLGAQAATQQQPHQQQRIADTSYWMQNESGFINSQPSM----- 126

  Fly   405 SSGGGSSLTH--HPHPHLTGSHGGYLLPSSSNESDEEGEEIIEEDDGTDGPSDSSSPHGDGNSKR 467
                ...|||  ...|.|. :.|..:.||.:.||..|...:.|:.......:.:.....:|..:|
Mosquito   127 ----AEFLTHIDSESPKLV-TQGIPIGPSDNMESVPEYPWMKEKKTARKATAQAEFVAENGLPRR 186

  Fly   468 KKKTRTVFSRAQVFQLESTFDLKRYLSSSERAGLAASLRLTETQVKIWFQNRRNKWKRQLAAELE 532
               .||.::..|:.:||..|...:||....|..:||||.|||.|||:||||||.|.|||..::.:
Mosquito   187 ---LRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQVKVWFQNRRMKHKRQTLSKTD 248

  Fly   533  532
            Mosquito   249  248

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HmxNP_001262674.1 Homeodomain 469..525 CDD:459649 26/55 (47%)
pbXP_061500970.1 None

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