DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Hmx and LOC5667563

DIOPT Version :10

Sequence 1:NP_001262674.1 Gene:Hmx / 42110 FlyBaseID:FBgn0264005 Length:718 Species:Drosophila melanogaster
Sequence 2:XP_001688391.3 Gene:LOC5667563 / 5667563 VectorBaseID:AGAMI1_004577 Length:456 Species:Anopheles gambiae


Alignment Length:534 Identity:117/534 - (21%)
Similarity:166/534 - (31%) Gaps:193/534 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    99 SHPVALH--HALHTFGHLHPAHGAT--HPALLQHALTPTGQQQQQQLQVQQQHQQSHVERLSPPM 159
            |.|:|.:  |..::.....|..|:|  .|.::...|:|                :...|||...:
Mosquito     5 SGPMASNELHLPYSSSEPPPGPGSTACEPPIVNRPLSP----------------RKFFERLYGHL 53

  Fly   160 KSPERNGGDEVQGHSLNNNNSKA------LNHNNTCASAAAAAAAAAVAAANLSNNSNDSNGSSG 218
            :..::        .:.||||..|      :...|...:...|:...|:.......:.:|.|.|  
Mosquito    54 ERDDK--------RATNNNNGSANGSSDEVRDRNVHVTVTKASDPCALIDETHRYHHHDHNSS-- 108

  Fly   219 GGGGKSTTGSNGFTSFSISSILSRSEPAK--------------KNGAAGLITPIPQLPQPGAGG- 268
                     ||...|.|::|.:|...|..              ..|:.||        |||.|. 
Mosquito   109 ---------SNSQKSVSVNSSISSGSPRSSLAVDIEEDSSQDASIGSPGL--------QPGGGDH 156

  Fly   269 PQDAAMLSRLGFISQWGALAGRYAALCPPGWPWAPQRLPFHSPTHDSSSTNTTENPPSPTSMSPN 333
            |:.                        ||.:|  |.|   |.....||||......|.||::...
Mosquito   157 PRQ------------------------PPAYP--PLR---HYGITSSSSTACASEYPVPTTIGGQ 192

  Fly   334 NNNNNSNTTASSNQASKSPSHHPLHPLYHPLGSQQQQQQQQQHQQHPQQQQHPQ-----QQQQQH 393
            .....:.|...|:.|...|...|                      |..|...|.     |.:.||
Mosquito   193 CYGFLAVTPQQSSSAGVLPVPAP----------------------HLTQPGDPALVGGLQHRPQH 235

  Fly   394 PHQPTTPTSSSSSGGGSSLTHHP--HPHLTGSHGGYLLPSS-----SNESDEEGEEIIEEDDGTD 451
            .....:...||:.|.|......|  .|....:|.|..||:.     :....:||           
Mosquito   236 GSMAVSTFFSSTGGAGGGGYGPPSFRPFFGIAHDGPQLPAGLSAFLARRRKKEG----------- 289

  Fly   452 GPSDSSSPHGDGNSKRKKKTRTVFSRAQVFQLESTFDLKRYLSSSERAGLAASLRLTETQVKIWF 516
                           |.::.||.||..|..:||..|....|:|...|..||..|:|:|||:||||
Mosquito   290 ---------------RPRRQRTTFSSEQTLRLEVEFHRNEYISRGRRFELAEVLKLSETQIKIWF 339

  Fly   517 QNRRNKWKRQLAAELE-------AANMANMAHAAQRLVRVPVLYHDGTTAGFVPPPP-----PHH 569
            ||||.|.||...|:::       |.|                    |....|.|..|     .||
Mosquito   340 QNRRAKDKRIEKAQIDQQYRTFAAVN--------------------GLLTPFSPQYPAALIATHH 384

  Fly   570 ----HPMQYYAAAR 579
                ||...:..|:
Mosquito   385 QHQQHPSHLHEQAQ 398

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HmxNP_001262674.1 Homeodomain 469..525 CDD:459649 27/55 (49%)
LOC5667563XP_001688391.3 None

Return to query results.
Submit another query.