DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hmx and nkx6.2

DIOPT Version :10

Sequence 1:NP_001262674.1 Gene:Hmx / 42110 FlyBaseID:FBgn0264005 Length:718 Species:Drosophila melanogaster
Sequence 2:NP_001129256.1 Gene:nkx6.2 / 565782 ZFINID:ZDB-GENE-070626-1 Length:278 Species:Danio rerio


Alignment Length:73 Identity:39/73 - (53%)
Similarity:52/73 - (71%) Gaps:3/73 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly   462 DGNSKRKKKTRTVFSRAQVFQLESTFDLKRYLSSSERAGLAASLRLTETQVKIWFQNRRNKWKRQ 526
            ||   :||.:|..||..|:|.||.||:..:||:..|||.||.||.:||:|||:||||||.||:::
Zfish   148 DG---KKKHSRPTFSGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRRTKWRKR 209

  Fly   527 LAAELEAA 534
            .|||:..|
Zfish   210 HAAEMATA 217

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HmxNP_001262674.1 Homeodomain 469..525 CDD:459649 32/55 (58%)
nkx6.2NP_001129256.1 Homeodomain 150..208 CDD:459649 33/57 (58%)

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