DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hmx and hmx2

DIOPT Version :9

Sequence 1:NP_001262674.1 Gene:Hmx / 42110 FlyBaseID:FBgn0264005 Length:718 Species:Drosophila melanogaster
Sequence 2:NP_001108570.3 Gene:hmx2 / 555632 ZFINID:ZDB-GENE-080506-2 Length:269 Species:Danio rerio


Alignment Length:295 Identity:110/295 - (37%)
Similarity:144/295 - (48%) Gaps:55/295 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   319 NTTENPPSPTSMSPNNNNNNSNTTASSNQASKSPSHHPLHPLYHPLGSQQQQQQQQQHQQHPQQQ 383
            |.:|:..|..|.:|.::....:...:||...:|            .|....:.|.::.......:
Zfish     2 NNSEDSGSKCSPAPISSFTIQSILGTSNDGVRS------------AGKDSPKSQPRKRTLSVSSE 54

  Fly   384 --------------QHPQQQQQQHPHQPTTPTSSSSSG-----GGSSLTHHPHPHLTGSHGGYLL 429
                          ..|...:..:||||......::.|     .|..    ..||||.|    :|
Zfish    55 DDCSAGEDSGDCYCSEPGVPESCNPHQPLNFCLGATKGLLPVQDGID----RRPHLTPS----IL 111

  Fly   430 PSSSNESDEEGEEI--IEEDDGTDGPSDSSSPHGDGNSKRKKKTRTVFSRAQVFQLESTFDLKRY 492
            |....|......::  :.||...|||...       |:..||||||||||:||:|||||||:|||
Zfish   112 PDYKEEQGRACSQMSPVSEDRQRDGPDKQ-------NNSAKKKTRTVFSRSQVYQLESTFDMKRY 169

  Fly   493 LSSSERAGLAASLRLTETQVKIWFQNRRNKWKRQLAAELEAANMANMAHA-AQRLVRVPVLYHDG 556
            |||||||.||:||:|||||||.|||||||||||||:|||||   |||||| ||.||.:|:::.:.
Zfish   170 LSSSERACLASSLQLTETQVKTWFQNRRNKWKRQLSAELEA---ANMAHASAQTLVGMPLVFREN 231

  Fly   557 TTAGFVPPPPPHHHPMQYYAAARNTSPPRPPLSSL 591
            :... ||.|.....|...|....|.  |..||.:|
Zfish   232 SLLR-VPVPRSIAFPTPLYYPGSNL--PALPLYNL 263

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HmxNP_001262674.1 Homeobox 471..524 CDD:278475 45/52 (87%)
hmx2NP_001108570.3 Homeobox 148..201 CDD:306543 45/52 (87%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0485
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR46110
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4603
SonicParanoid 1 1.000 - - X983
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
65.900

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