Protein Alignment Hmx and Bsx

DIOPT Version :10

• Sequence 1: NP_001262674.1
• Gene: Hmx / 42110
• FlyBaseID: FBgn0264005
• Length: 718
• Species: Drosophila melanogaster
• Sequence 2: NP_001178924.1
• Gene: Bsx / 500982
• RGDID: 1565120
• Length: 232
• Species: Rattus norvegicus
• Alignment Length: 258
• Identity: 74/258 - (28%)
• Similarity: 96/258 - (37%)
• Gaps: 81/258 - (31%)

  Fly   306 LPFHSPTHDSSSTNTTE--------NPPSPTSMSPNNNNNNSNTTASSNQASKSPSHHPLHPLYH 362
            |.|.||.|.:||...|.        :.|.|.           ...|..:.||...|..||....:
  Rat     3 LNFTSPLHPASSQRPTSFFIEDILLHKPKPL-----------REVAPDHFASSLASRVPLLDYGY 56

  Fly   363 PLGSQQQQQQQQQHQQHPQQQQHPQQQQQQHPHQPTTPTSSSSSGGGSSLTHHPHPHLTGSHGGY 427
            ||                               .| |||..:..      |||| .|....|..|
  Rat    57 PL-------------------------------MP-TPTLLTPH------THHP-LHKGEHHHPY 82

  Fly   428 LLPSSSNESDEEGEEIIEEDDGTDGPSDSSSPHGD-----GNSKRKKKTRTVFSRAQVFQLESTF 487
            .|.:|..                  |..:..||..     |...|::|.|||||.:|:..||..|
  Rat    83 FLATSGM------------------PVPALFPHPQHAELPGKHCRRRKARTVFSDSQLSGLEKRF 129

  Fly   488 DLKRYLSSSERAGLAASLRLTETQVKIWFQNRRNKWKRQLAAELEAANMANMAHAAQRLVRVP 550
            :::||||:.||..||.:|.|:|||||.||||||.|.|:||....:....|:...:.:...|.|
  Rat   130 EIQRYLSTPERVELATALSLSETQVKTWFQNRRMKHKKQLRKSQDEPKAADGPESPEGSPRAP 192

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Hmx	NP_001262674.1	Homeodomain	469..525	CDD:459649	32/55 (58%)
Bsx	NP_001178924.1	Homeodomain	111..167	CDD:459649	32/55 (58%)