Protein Alignment Hmx and Abd-B

DIOPT Version :10

• Sequence 1: NP_001262674.1
• Gene: Hmx / 42110
• FlyBaseID: FBgn0264005
• Length: 718
• Species: Drosophila melanogaster
• Sequence 2: NP_524896.2
• Gene: Abd-B / 47763
• FlyBaseID: FBgn0000015
• Length: 493
• Species: Drosophila melanogaster
• Alignment Length: 587
• Identity: 132/587 - (22%)
• Similarity: 183/587 - (31%)
• Gaps: 223/587 - (37%)

  Fly    86 LHHHLQHHLSSLGSHPVALHHALHTFGHLHPAHGATHPAL------LQHAL-------------- 130
            ||||..|||.          ..|||..|.|.|    ||.|      .|||:
  Fly    31 LHHHAHHHLP----------QPLHTTSHHHSA----HPHLQQQQQQQQHAVVASSPSSVLQQQQQ 81

  Fly   131 --------TPT----------------------GQQQQQQLQVQQQHQQSH-----VERLSPPMK 160
                    |||                      ..|||||||.|||.||..     |.....|.:
  Fly    82 QSTPTTHSTPTHAVMYEDPPPVPLVAVQQQHLPAPQQQQQLQQQQQQQQQQLATTPVAGALSPAQ 146

  Fly   161 SPERNGGDEVQGHSLNNNNSKALNHNNTCASAAAAAAAAAVAAANLSNNSNDSNGSSGGGGGKST 225
            :|  .|....|...|.:.:.:.|....|..|.|:.      |::||.......|.:...|..:..
  Fly   147 TP--TGPSAQQQQHLTSPHHQQLPQQQTPNSVASG------ASSNLQQQQQQQNAAVAPGQTQIV 203

  Fly   226 TGSNGFTSFSISSILSRSE-------------PAKKNGAAGLITPIPQLPQPGAGGPQDAAMLSR 277
            ..:.  .|.|.||:.|:.|             ||.:.|             ||......||:...
  Fly   204 APTT--ASVSPSSVSSQKEDINMSIQLAPLHIPAIRAG-------------PGFETDTSAAVKRH 253

  Fly   278 L--------GFISQWGALAGRY-----------AALCPPGWPWAPQRLPFHSPTHDSSSTNTTEN 323
            .        ||...:|  :|.|           ....|.|..|.|...|              :.
  Fly   254 TAHWAYNDEGFNQHYG--SGYYDRKHMFAYPYPETQFPVGQYWGPNYRP--------------DQ 302

  Fly   324 PPSPTSMSPNNNNNNSNTTASSNQA---SKSPSHHPLHPLYHPLGSQQQQQQQQQHQQHPQQQQH 385
            ..|..:.:...|....:.:|::.|:   :.:.|:.|  |.|...|..:
  Fly   303 TTSAAAAAAYMNEAERHVSAAARQSVEGTSTSSYEP--PTYSSPGGLR----------------- 348

  Fly   386 PQQQQQQHPHQPTTPTSSSSSGGGSSLTHHPHPHLTGSHGGYLLPSSSNESDEEGEEIIEEDDGT 450
                     ..|:...|||.:.||.|:             |.:.|.:.|....|....:
  Fly   349 ---------GYPSENYSSSGASGGLSV-------------GAVGPCTPNPGLHEWTGQV------ 385

  Fly   451 DGPSDSSSPHGDGNSKRKKKTRTVFSRAQVFQLESTFDLKRYLSSSERAGLAASLRLTETQVKIW 515
                          |.|||  |..:|:.|..:||..|....|:|..:|..||.:|:|||.|||||
  Fly   386 --------------SVRKK--RKPYSKFQTLELEKEFLFNAYVSKQKRWELARNLQLTERQVKIW 434

  Fly   516 FQNRRNKWKRQLAAELEAANMANMAHAAQRLVRVPVLYHDGTTAGFVPPPPPHHH-----PMQYY 575
            |||||.|.|:....:....|..|.:.:.....:....:|.|            ||     .|.::
  Fly   435 FQNRRMKNKKNSQRQANQQNNNNNSSSNHNHAQATQQHHSG------------HHLNLSLNMGHH 487

  Fly   576 AA 577
            ||
  Fly   488 AA 489

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Hmx	NP_001262674.1	Homeodomain	469..525	CDD:459649	27/55 (49%)
Abd-B	NP_524896.2	Homeodomain	388..444	CDD:459649	29/57 (51%)