DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hmx and HHEX

DIOPT Version :10

Sequence 1:NP_001262674.1 Gene:Hmx / 42110 FlyBaseID:FBgn0264005 Length:718 Species:Drosophila melanogaster
Sequence 2:NP_650938.2 Gene:HHEX / 42495 FlyBaseID:FBgn0038852 Length:323 Species:Drosophila melanogaster


Alignment Length:476 Identity:97/476 - (20%)
Similarity:153/476 - (32%) Gaps:194/476 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly   233 SFSISSILSRSEPAKKNGAAGLITPIPQLPQPGAGGPQDAAMLSRLGFISQWGALAGRYAALCPP 297
            :|||.:||.:...:.::             |...|..|....::        ..:|..:|...|.
  Fly    11 AFSIENILEQKSSSHRS-------------QSRRGSSQSPVAVT--------AGIATPHALAMPK 54

  Fly   298 GWPWAPQRLPFHSPTHDSSSTNTTENPPSPTSMSPNNNNNNSNTTASSNQASKS--------PSH 354
            .                |.:|.::...|:|:..|..|..:.|...|::..|.||        |:.
  Fly    55 A----------------SLATGSSSAAPTPSPSSATNIYDLSREAAAAQYAMKSMDSSAVLAPTS 103

  Fly   355 HPLHPLYHPLGSQQQQQQQQQHQQHPQQQQHPQQQQQQHPH------------QPT------TPT 401
            ...:|:| |..:....||..|.|::|....         ||            |||      :|.
  Fly   104 LRFNPIY-PDPASLFYQQVLQLQKNPSLFM---------PHFQAAAVAAAAAVQPTAYCDQYSPF 158

  Fly   402 SSSSSGGGSSLTHHPHPHLTGSHGGYL----LPSSSNESDEEGEEIIEEDDGTDGPSDSSSPHGD 462
            :....|       .|:|   .|....|    .|::|......|                      
  Fly   159 TMDCEG-------FPNP---ASAAAALYCNAYPAASFYMSNFG---------------------- 191

  Fly   463 GNSKRKKKTRTVFSRAQVFQLESTFDLKRYLSSSERAGLAASLRLTETQVKIWFQNRRNKWKRQL 527
               .::|..:..|:..|...||:.|...:|||..||..||..|:||:.|||.||||||.||:|  
  Fly   192 ---VKRKGGQIRFTSQQTKNLEARFASSKYLSPEERRHLALQLKLTDRQVKTWFQNRRAKWRR-- 251

  Fly   528 AAELEAANMANMAHAAQRLVRVPVLYHDGTTAGFVPPPPPHHHPMQYYAAARNTSPPRPPLSSLV 592
                  ||::..:.:||           |..||.....|         ::|.::|   .|:.:|.
  Fly   252 ------ANLSKRSASAQ-----------GPIAGAAVGSP---------SSASSSS---VPVLNLG 287

  Fly   593 XGVGCLATAPMSLLKPPNSMAHPPHPQPPPPAPLHMQQRSFLGCEQLTETDMDSDSEQERSHMMD 657
            .|..|                                             ...|| |::|.::.:
  Fly   288 SGSRC---------------------------------------------GQQSD-EEDRMYLSE 306

  Fly   658 DEDAAIDVEADEEQESASPVP 678
            |     |.:.||::..|...|
  Fly   307 D-----DEDDDEDEGEADETP 322

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HmxNP_001262674.1 Homeodomain 469..525 CDD:459649 27/55 (49%)
HHEXNP_650938.2 Homeodomain 200..251 CDD:459649 26/50 (52%)

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