Protein Alignment Hmx and Ubx

DIOPT Version :10

• Sequence 1: NP_001262674.1
• Gene: Hmx / 42110
• FlyBaseID: FBgn0264005
• Length: 718
• Species: Drosophila melanogaster
• Sequence 2: NP_536752.1
• Gene: Ubx / 42034
• FlyBaseID: FBgn0003944
• Length: 389
• Species: Drosophila melanogaster
• Alignment Length: 500
• Identity: 108/500 - (21%)
• Similarity: 159/500 - (31%)
• Gaps: 150/500 - (30%)

  Fly    55 PNTAAGTPTTSASGGNHFHHSPSGGAVPPAVLHHHLQHHLSSLGSHPVALHHALHTFGHLHPAHG 119
            |:.|.|  ....|||   ||..:..|...|.....|     |||..|.|.||...|      ...
  Fly    15 PHQATG--MAMGSGG---HHDQTASAAAAAYRGFPL-----SLGMSPYANHHLQRT------TQD 63

  Fly   120 ATHPALLQHALTP-----TGQQQQQQLQVQQQHQQSHVERLSPPMKSPERNGGDEVQGHSLNNNN 179
            :.:.|.:..|...     .|..:|..|.::                      .|.|.|:....|
  Fly    64 SPYDASITAACNKIYGDGAGAYKQDCLNIK----------------------ADAVNGYKDIWN- 105

  Fly   180 SKALNHNNTCASAAAAAAAAAVAAANLSNNSNDSNGSSGGGGGKSTTGSNGFTSFSISSILSRSE 244
                                       :..||...|..|||||....|:.|..:.:..:..:.:
  Fly   106 ---------------------------TGGSNGGGGGGGGGGGGGAGGTGGAGNANGGNAANAN- 142

  Fly   245 PAKKNGAAGL-ITPIPQLPQPGAGGPQDAAMLSRLGFISQWGALAGRYAALCPPGWPWAPQRLPF 308
             .:.|.|.|: :.|....|....||..|.:..|.   :|..|..||...::
  Fly   143 -GQNNPAGGMPVRPSACTPDSRVGGYLDTSGGSP---VSHRGGSAGGNVSV-------------- 189

  Fly   309 HSPTHDSSSTNTTENPPSPTSMSPNNNNNNSNTTASSNQASKSPSHHPLHPLYHPLGSQQQQQQQ 373
                  |..........|...::......|:|.|. |..|:::.:...||             |.
  Fly   190 ------SGGNGNAGGVQSGVGVAGAGTAWNANCTI-SGAAAQTAAASSLH-------------QA 234

  Fly   374 QQHQQHPQQQQHPQQQQQQHPHQPTTPTSSSSSGGGSSLTHHPHPHLTGSHGGYLLPSSSNESDE 438
            ..|..:|......:        .|..||.|...   |.||         .:||.........|:.
  Fly   235 SNHTFYPWMAIAGE--------CPEDPTKSKIR---SDLT---------QYGGISTDMGKRYSES 279

  Fly   439 EGEEIIEEDDGTDGPSDSSSPHGDGNSKRKKKTRTVFSRAQVFQLESTFDLKRYLSSSERAGLAA 503
            ....::.:..||:|              .:::.|..::|.|..:||..|....||:...|..:|.
  Fly   280 LAGSLLPDWLGTNG--------------LRRRGRQTYTRYQTLELEKEFHTNHYLTRRRRIEMAH 330

  Fly   504 SLRLTETQVKIWFQNRRNKWKRQLAA-----ELEAANMANMAHAA 543
            :|.|||.|:||||||||.|.|:::.|     |.|....|..|.||
  Fly   331 ALCLTERQIKIWFQNRRMKLKKEIQAIKELNEQEKQAQAQKAAAA 375

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Hmx	NP_001262674.1	Homeodomain	469..525	CDD:459649	24/55 (44%)
Ubx	NP_536752.1	Homeodomain	296..352	CDD:459649	24/55 (44%)