DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hmx and NK7.1

DIOPT Version :10

Sequence 1:NP_001262674.1 Gene:Hmx / 42110 FlyBaseID:FBgn0264005 Length:718 Species:Drosophila melanogaster
Sequence 2:NP_650357.2 Gene:NK7.1 / 41747 FlyBaseID:FBgn0024321 Length:721 Species:Drosophila melanogaster


Alignment Length:769 Identity:163/769 - (21%)
Similarity:259/769 - (33%) Gaps:248/769 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   113 HLHPAHGATHPALLQHALTPTGQQQQQQLQVQQQH--QQSHVERLSPPMKSPERNGGDEVQGHSL 175
            ||..|..|:  ..|.|.......|||||.|.||.|  ||.|..:.....:..:::..|..:....
  Fly    10 HLEAAEMAS--GALAHNYGIVKDQQQQQQQQQQLHHLQQQHHHQQQQQQQQQQQSNSDLYKMACN 72

  Fly   176 NNNNSKALNHNNT-----CASAAAAAAAAAVAAANLSNNSNDSNGSSGGGGGKSTTGSNGFTSFS 235
            ..|.|..|....|     ..|....:....|....:.:|:|                        
  Fly    73 GYNYSSPLTIPPTSMTTHMVSPIGNSKEKLVNMLRVRDNNN------------------------ 113

  Fly   236 ISSILSRSEPAK--KNGAAGLITPIPQLPQPGAGGPQDAAMLSRLGFISQWGALAGRYAALCPPG 298
            ::|.:|.|.|..  :.....::.|.|....|....||...:.     :.|........|....||
  Fly   114 MASTISDSPPTTFLQKQLEAVVAPRPSSVHPQHQQPQQQTVQ-----LQQQRRSVSTPAITTTPG 173

  Fly   299 WP--W---APQRLPFHSPTHD------------------------SSSTNTTENP--------PS 326
            .|  |   ...|||.|...|.                        :.|.|:...|        .|
  Fly   174 PPTNWHAHVYDRLPPHPTPHSIADILGMSFVKKERPEVAFDAQGPAKSPNSILKPYQEQQPIRSS 238

  Fly   327 PTSMSPNNNNNNSNTTASSNQAS--------------KSPSHHPLHPLY---------HPLGSQQ 368
            ..|||..:...::....:::.|:              .:|...||:...         .|:.:.:
  Fly   239 SISMSDASEEESAAVAGATSAATAAAAVAATITAATVATPLDQPLNLCVVKKSRDSNNSPMPATK 303

  Fly   369 QQQQQQQHQQHPQQQQHPQQQQQQHPHQPTTPTSSSSSGGGSSLTHHP----HPHLTGSHGGYLL 429
            |.|...:.....:....|..::::.......|...|.:|...||....    :....||:....:
  Fly   304 QSQILGKSATKKESSGKPAAKKKKLSSTVALPPDISPTGSSDSLMRDKLMANNSSSPGSNVNAQM 368

  Fly   430 PSSSNESDEEGEEIIEEDDGTDGPSDSSSPHGDGNSKRKKKTRTVFSRAQVFQLESTFDLKRYLS 494
            .|::|.:.|     ..|||...|.:|         ::||||.||.|:..|:|:||..|:.|:|||
  Fly   369 QSNANSTLE-----TTEDDSDSGSTD---------ARRKKKARTTFTGRQIFELEKMFENKKYLS 419

  Fly   495 SSERAGLAASLRLTETQVKIWFQNRRNKWKRQ------LAAELEAAN------------------ 535
            :|||..:|..|.:|||||||||||||.|||:|      .|||.:::|                  
  Fly   420 ASERTEMAKLLMVTETQVKIWFQNRRTKWKKQDNVTNNEAAEHKSSNAKPGATGTATTTPSGEPT 484

  Fly   536 -----------MANMAHAAQRLVRVPVLYHDGT--------------TAGFVPPPPPHHHPMQYY 575
                       :.|.|..|: :.:.|...:.|:              :.|.||            
  Fly   485 DKRSSNATSPTVGNAATIAE-IKKSPKSPNRGSNNNNNNTLNNNVNNSEGKVP------------ 536

  Fly   576 AAARNTSPPRPPLSSLVXGVGCLATA---------------PMSLLKPPNS----MAH------- 614
             |.::|:..:..|::|:...  :.||               |....:|.||    :.|       
  Fly   537 -AKQSTTKIKKQLNALLEKT--VKTANQAHRSAELESSDQKPAVEKRPNNSNENQLLHQRLHQHA 598

  Fly   615 -PPHPQPPPP-------------APLHMQ-----QRSFLGCEQLTETDMDS-------------- 646
             |...:|..|             :|.|.:     ||:.:...||||.|.:|              
  Fly   599 IPLTVEPAAPLEQTEKLDIKREESPQHRELQLSLQRAAIQNGQLTEMDFESKLAASKISIALAMA 663

  Fly   647 DSEQERSHMMDDEDAAIDVEAD---EEQESASPVPSATPPKSSLCLESKESGGQ 697
            :.:.:....:..|.::.:.|.|   ||:|....|.|:....|   :|:.:|..|
  Fly   664 NKQMQPEKRVKTESSSSEGEGDGDGEEEEEEEEVSSSEHGDS---IEAHDSQDQ 714

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HmxNP_001262674.1 Homeodomain 469..525 CDD:459649 34/55 (62%)
NK7.1NP_650357.2 Homeodomain 394..450 CDD:459649 34/55 (62%)

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