DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hmx and mnx2b

DIOPT Version :10

Sequence 1:NP_001262674.1 Gene:Hmx / 42110 FlyBaseID:FBgn0264005 Length:718 Species:Drosophila melanogaster
Sequence 2:NP_001315287.1 Gene:mnx2b / 406206 ZFINID:ZDB-GENE-040415-2 Length:328 Species:Danio rerio


Alignment Length:167 Identity:55/167 - (32%)
Similarity:78/167 - (46%) Gaps:39/167 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   394 PHQPTTPTSSSSSGGG----------SSLTHHPHPH------LTGS-------HGGYLLPSSSNE 435
            |...|||....|:.||          :.|| .|:|.      :.||       ..|.::|...:.
Zfish    79 PGMYTTPMYPISALGGQHPALAYTGFTQLT-QPYPEQLKAAAMAGSLPLEHWIRAGIMVPRLPDY 142

  Fly   436 SDEEGE-EIIEEDDGTDGPSDSSSPHGDGNSKRKKKTRTVFSRAQVFQLESTFDLKRYLSSSERA 499
            :.|.|. ::.....|..|              :.::.||.|:..|:.:||:.|.|.:|||..:|.
Zfish   143 TCEWGSIQMTAPQSGLMG--------------KCRRPRTAFTSQQLLELENQFKLNKYLSRPKRF 193

  Fly   500 GLAASLRLTETQVKIWFQNRRNKWKRQLAAELEAANM 536
            .:|.||.||||||||||||||.||||...|:.:||.:
Zfish   194 EVATSLMLTETQVKIWFQNRRMKWKRSRKAKEQAAQV 230

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HmxNP_001262674.1 Homeodomain 469..525 CDD:459649 31/55 (56%)
mnx2bNP_001315287.1 Homeodomain 163..219 CDD:459649 31/55 (56%)

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