DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hmx and emx1

DIOPT Version :10

Sequence 1:NP_001262674.1 Gene:Hmx / 42110 FlyBaseID:FBgn0264005 Length:718 Species:Drosophila melanogaster
Sequence 2:NP_937787.1 Gene:emx1 / 378964 ZFINID:ZDB-GENE-031007-7 Length:231 Species:Danio rerio


Alignment Length:224 Identity:66/224 - (29%)
Similarity:92/224 - (41%) Gaps:64/224 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   320 TTENPPSPTSMS---PNNNNNNSNTTASSNQASKSP--------SHHPL--HPLYHPLGSQQQQQ 371
            |.|:|..||::|   |.::..|...:.:......:|        :|.||  ||  |.|||     
Zfish    23 TLEDPIRPTALSYSAPADSFLNGYQSPAGRALYPNPELVFSETVNHAPLSMHP--HQLGS----- 80

  Fly   372 QQQQHQQHPQQQQHPQQQQQQHPHQPTTPTSSSSSGGGSSLTHHPHPHLTGSHGGYLLPSSSNES 436
                     ...|||.....|| .:|              |..:|.. |.....|:..       
Zfish    81 ---------APLQHPHFFGTQH-REP--------------LNFYPWV-LRNRFFGHRF------- 113

  Fly   437 DEEGEEIIEEDDGTDGPSDSSSPHGDGNSKRKKKTRTVFSRAQVFQLESTFDLKRYLSSSERAGL 501
                       .|.|...|:...||. .:::.|:.||.||.:|:.:||..|:...|:..:||..|
Zfish   114 -----------QGNDVSQDTLLLHGP-FARKPKRIRTAFSPSQLLRLERAFEKNHYVVGAERKQL 166

  Fly   502 AASLRLTETQVKIWFQNRRNKWKRQLAAE 530
            |.||.|:|||||:||||||.|:|||...|
Zfish   167 ANSLSLSETQVKVWFQNRRTKYKRQKLEE 195

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HmxNP_001262674.1 Homeodomain 469..525 CDD:459649 29/55 (53%)
emx1NP_937787.1 Homeodomain 134..190 CDD:459649 29/55 (53%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 193..231 1/3 (33%)

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