Protein Alignment Hmx and lms

DIOPT Version :10

• Sequence 1: NP_001262674.1
• Gene: Hmx / 42110
• FlyBaseID: FBgn0264005
• Length: 718
• Species: Drosophila melanogaster
• Sequence 2: NP_611491.2
• Gene: lms / 37322
• FlyBaseID: FBgn0034520
• Length: 378
• Species: Drosophila melanogaster
• Alignment Length: 375
• Identity: 96/375 - (25%)
• Similarity: 137/375 - (36%)
• Gaps: 118/375 - (31%)

  Fly   410 SSLTHHPH----------PHLTGS------------HGGYLLPSSSNESDEEGEEIIEEDDGTDG 452
            |::..:||          |.:..|            .||..|.:|...|......:  :|:..||
  Fly     5 SAVRRYPHSFSIEQILAKPEMRSSTSFEDSVQDESGRGGNCLGASRASSPATSSCL--DDNMDDG 67

  Fly   453 PSDSSSPHGDGN---SKRKKKTRTVFSRAQVFQLESTFDLKRYLSSSERAGLAASLRLTETQVKI 514
            .||......|||   ..|||:.||.||.||:..||:.|:..:|||.::|..||..|:|||||:||
  Fly    68 KSDIDLASDDGNGLGDDRKKRPRTAFSAAQIKALETEFERGKYLSVAKRTALAKQLQLTETQIKI 132

  Fly   515 WFQNRRNKWKRQLAAELEA-----------ANMANMAHAAQRL------------VRVPVLYHDG 556
            ||||||.||||:..:::|.           ..:|.......||            ::..:|...|
  Fly   133 WFQNRRTKWKRKYTSDVETLASHYYAQLGIGGLARPMVVGDRLWLFSQTPTGPTPIQSIMLNGSG 197

  Fly   557 TTAGFVPPPPPHHHPMQYYAAARNTSPPRPPL-----------SSLVXGVGCLATAPMSLLKPP- 609
            :.|...........||:.||    ||...|||           :.|. |.......|..:.|||
  Fly   198 SAAPMASATTATGSPMRPYA----TSGGMPPLPGPSVMESARNAILARGQPLNFALPFGVAKPPA 258

  Fly   610 ---NSMAHPPHPQP--------------------------PPPAPL------------------- 626
               .:.::.|..:|                          ||.|..
  Fly   259 GGVPAASYIPRCKPYATSYVDYAASLPTNESYLQMKYATLPPEAESGASNGLAELERVFGDANAN 323

  Fly   627 HMQQRSFLGCEQLTETDMDSDSEQERSH---MMDDEDAAIDVE-ADEEQE 672
            .:||||.......|....|..::.:||.   ..:.|.:.||.| .||::|
  Fly   324 FLQQRSTPVAGTATAYGHDGLNQAQRSRRPTQSESECSDIDCEHLDEDEE 373

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Hmx	NP_001262674.1	Homeodomain	469..525	CDD:459649	32/55 (58%)
lms	NP_611491.2	Cnd2	33..>106	CDD:450400	24/74 (32%)
		Homeodomain	87..143	CDD:459649	32/55 (58%)