DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hmx and unpg

DIOPT Version :10

Sequence 1:NP_001262674.1 Gene:Hmx / 42110 FlyBaseID:FBgn0264005 Length:718 Species:Drosophila melanogaster
Sequence 2:NP_477146.1 Gene:unpg / 35942 FlyBaseID:FBgn0015561 Length:485 Species:Drosophila melanogaster


Alignment Length:487 Identity:127/487 - (26%)
Similarity:173/487 - (35%) Gaps:148/487 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   234 FSISSILSRSEPAKKNGAAGLITPIPQLPQPGAGGPQDA---------AML--SRLG-----FIS 282
            |||.|:::...||         |..|..|.......|:|         ||:  |.||     ..:
  Fly    31 FSIESLIANQTPA---------TATPPSPPEERDQEQEAEQEQELSARAMVASSALGLTQFPLYN 86

  Fly   283 QW--GALA------------GRYAALCPPGWPWA--------PQRLPFHSPTHDSSSTNTTENPP 325
            .|  |..|            |.|....|.|.|.|        ||..|.|.|||      ..|...
  Fly    87 PWLHGYFAQNHERLTHLIAGGCYLPSSPAGHPAAQQPQAQAQPQPPPPHPPTH------ALEKQL 145

  Fly   326 SPTSMSPNNNNNNSNTTASSNQASKSPSHHPLHPL-----YHPLGSQQQQQQQQQHQQHPQQQQH 385
            .||...|.:........|::..|....|:..|..|     .|.|....:.|......:..:.|.:
  Fly   146 PPTLPHPLDTRFLPFNPAAAGVAPTDLSYRRLAELMNQDYVHSLSVHARLQHMAAAGRMHEDQAN 210

  Fly   386 PQQQQQQHPHQPTTPTSSSSSGGGS------------------------SLTHHPHPHLTGS--- 423
            |...|.|.|..|...:|.:.||..|                        |||..|. :..|.   
  Fly   211 PGMAQLQEPTPPQAHSSPAKSGSHSPMEPALDVGMDEDFECSGDSCSDISLTMSPR-NYNGEMDK 274

  Fly   424 --HGGYLLPSSSNESDEEGEEIIEEDDGTDGPSDSSSPHGDGNSKRKKKTRTVFSRAQVFQLEST 486
              :|.|....|.:.||:||.:...|..|..| .||.......|||.::: ||.|:..|:.:||..
  Fly   275 SRNGAYTNSDSEDCSDDEGAQSRHEGGGMGG-KDSQGNGSSSNSKSRRR-RTAFTSEQLLELERE 337

  Fly   487 FDLKRYLSSSERAGLAASLRLTETQVKIWFQNRRNKWKRQLAAELEAANMANMAHAAQRLVRVPV 551
            |..|:|||.:||:.:|.||:|:|.||||||||||.||||..|        ...:|...|      
  Fly   338 FHAKKYLSLTERSQIATSLKLSEVQVKIWFQNRRAKWKRVKA--------GLTSHGLGR------ 388

  Fly   552 LYHDGTTAG--FVPPPPPH---------HHPMQ-------------------------YYAAARN 580
               :|||:|  .|.|.|.|         |..::                         :..:...
  Fly   389 ---NGTTSGTKIVVPIPVHVNRFAVRSQHQQLEKMCLSGPKPDLRKKLSAEAIGGFEKFSGSTNA 450

  Fly   581 TSPPRPPLS-----SLVXGVGCLATAPMSLLK 607
            :||...|:.     .:. |||...:.|:||.:
  Fly   451 SSPSGGPVGLGVGVGVGVGVGLGVSTPLSLAR 482

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HmxNP_001262674.1 Homeodomain 469..525 CDD:459649 30/55 (55%)
unpgNP_477146.1 Homeodomain 324..376 CDD:459649 29/51 (57%)

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