DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Hmx and HOXB3

DIOPT Version :10

Sequence 1:NP_001262674.1 Gene:Hmx / 42110 FlyBaseID:FBgn0264005 Length:718 Species:Drosophila melanogaster
Sequence 2:XP_016880049.1 Gene:HOXB3 / 3213 HGNCID:5114 Length:578 Species:Homo sapiens


Alignment Length:557 Identity:128/557 - (22%)
Similarity:172/557 - (30%) Gaps:194/557 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   211 NDSNGSSGGGGGKSTTGSNGFTSFSISSILSRSEPAKKNGAAGLITPIPQLPQPGA--GGPQDAA 273
            |.:.|..|||.|.|.:|                             |:|||   |.  ||.....
Human    76 NKAGGGGGGGVGASASG-----------------------------PLPQL---GGTLGGCWGLL 108

  Fly   274 MLSRL--GFISQWGALAGRYAALCPPGWPWAPQRLPFHSPTHDSSSTNTTENP-----PSPTSMS 331
            .:.||  |::.:.....||.:.    .|..||.|               |:.|     |.| |..
Human   109 RVERLGCGWLRRRSPSLGRGSG----AWQSAPAR---------------TQRPAARRCPRP-SGR 153

  Fly   332 PNNNNNNSNTTASS-------------NQASKSPSHHPLHPLY-------HPLGSQQQQQQQQQH 376
            |:...:.|....|.             :..:|:.:|  |...|       ..||:.....:.::.
Human   154 PHRRGDLSPAARSGARCEYILCLPVLPSSVAKAATH--LEGDYQRSACSLQSLGNAAPHAKSKEL 216

  Fly   377 Q---QHPQQQQHPQQQQQQHP---HQPTTPTSSSSSGGG--------------SSLTHHPHPHLT 421
            .   ..|.....|.......|   ..||:.||:||:|||              |:||....|.:.
Human   217 NGSCMRPGLAPEPLSAPPGSPPPSAAPTSATSNSSNGGGPSKSGPPKCGPGTNSTLTKQIFPWMK 281

  Fly   422 GSHGGYLLPSSSNESDE----------EGEEIIEEDDGTDGPSDSSSPHGDGNSKRKKKTRTVFS 476
            .|.....|.::|..:.|          .|........|..|.....||.|...|||   .||.::
Human   282 ESRQTSKLKNNSPGTAEGCGGGGGGGGGGGSGGSGGGGGGGGGGDKSPPGSAASKR---ARTAYT 343

  Fly   477 RAQVFQLESTFDLKRYLSSSERAGLAASLRLTETQVKIWFQNRRNKWKRQLAAE----------- 530
            .||:.:||..|...|||....|..:|..|.|:|.|:||||||||.|:|:...|:           
Human   344 SAQLVELEKEFHFNRYLCRPRRVEMANLLNLSERQIKIWFQNRRMKYKKDQKAKGLASSSGGPSP 408

  Fly   531 --------LEAANMANMAH----------------AAQRLVRVPVLYHD-----GTTAGFVPPPP 566
                    ...|...|..|                |.|....:|..|..     |....:.|.|.
Human   409 AGSPPQPMQSTAGFMNALHSMTPSYESPSPPAFGKAHQNAYALPSNYQPPLKGCGAPQKYPPTPA 473

  Fly   567 PHHHP--------------MQ----YYAAARNTSPPRPPLSSLVXGVGCLATAPMSLL----KPP 609
            |.:.|              ||    |........|..||....:.|:..|:..|...|    .||
Human   474 PEYEPHVLQANGGAYGTPTMQGSPVYVGGGGYADPLPPPAGPSLYGLNHLSHHPSGNLDYNGAPP 538

  Fly   610 NSMAHPPHPQPPPPAPLHMQQRSFLGCEQLTETDMDS 646
              ||...|..|..|.|              |.||:.|
Human   539 --MAPSQHHGPCEPHP--------------TYTDLSS 559

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HmxNP_001262674.1 Homeodomain 469..525 CDD:459649 25/55 (45%)
HOXB3XP_016880049.1 Homeodomain 336..392 CDD:459649 27/58 (47%)
DUF4074 513..576 CDD:463833 16/63 (25%)

Return to query results.
Submit another query.