DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Hmx and dlx3b

DIOPT Version :10

Sequence 1:NP_001262674.1 Gene:Hmx / 42110 FlyBaseID:FBgn0264005 Length:718 Species:Drosophila melanogaster
Sequence 2:NP_571397.2 Gene:dlx3b / 30585 ZFINID:ZDB-GENE-980526-280 Length:269 Species:Danio rerio


Alignment Length:344 Identity:79/344 - (22%)
Similarity:123/344 - (35%) Gaps:118/344 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   311 PTHDSSSTNTTENPPSPTSMSPNNNNNNSNTTASSNQASKSPSHHPLHPLYHPLGSQQQQQQQQQ 375
            ||:|......:.:.....|..|.:.::.:...:|:.......|||                   :
Zfish     4 PTYDRKIPGISTDLSGSMSCHPTSKDSPTLPESSATDMGYYSSHH-------------------E 49

  Fly   376 HQQHPQQQQHPQQQQQQHPHQPTTPTSSSSSGGGSSLTHHPHPHLTGSHGGYLLPSSSNESDEEG 440
            :.|.|     |..||....||.......::.|...:.|.:|: :....:|.|     :.:.....
Zfish    50 YYQSP-----PYPQQMNSYHQFNLSGMGATPGAYPTKTEYPY-NTYRQYGHY-----NRDLQTPP 103

  Fly   441 EEIIEEDDGTDGPSDSSSPHGDGNSKRKKKTRTVFSRAQVFQLESTFDLKRYLSSSERAGLAASL 505
            :..::|:..|:....:..|      |:.:|.||::|..|:..|:..|...:||:..|||.|||.|
Zfish   104 QSAVKEEPETEVRMVNGKP------KKIRKPRTIYSSYQLAALQRRFQKAQYLALPERAELAAQL 162

  Fly   506 RLTETQVKIWFQNRRNKWKRQLAAELEAANMANMAHAAQRLVRVPVLYHDGTTAGFVPPPPPHHH 570
            .||:|||||||||||:|:|:                          ||.:|..       |..|.
Zfish   163 GLTQTQVKIWFQNRRSKFKK--------------------------LYKNGEV-------PLEHS 194

  Fly   571 PMQYYAAARNTSP-------------------PRPPLSSLVXGVGCLATAPMSLLKPP------- 609
            |....:.|.|:.|                   |:|||||                .||       
Zfish   195 PNASDSMACNSPPSPAVWDNNAHSSQVNRGQIPQPPLSS----------------TPPYMEDYSN 243

  Fly   610 ------NSMAHP-PHPQPP 621
                  :.:.|| .||.||
Zfish   244 HWYQQGSHLQHPVHHPGPP 262

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HmxNP_001262674.1 Homeodomain 469..525 CDD:459649 30/55 (55%)
dlx3bNP_571397.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..41 6/36 (17%)
DLL_N 28..104 CDD:463567 16/105 (15%)
Homeodomain 126..182 CDD:459649 30/55 (55%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 191..242 13/66 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 250..269 6/13 (46%)

Return to query results.
Submit another query.