DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hmx and dlx4b

DIOPT Version :9

Sequence 1:NP_001262674.1 Gene:Hmx / 42110 FlyBaseID:FBgn0264005 Length:718 Species:Drosophila melanogaster
Sequence 2:NP_571393.1 Gene:dlx4b / 30581 ZFINID:ZDB-GENE-990415-50 Length:254 Species:Danio rerio


Alignment Length:322 Identity:83/322 - (25%)
Similarity:129/322 - (40%) Gaps:89/322 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   326 SPTSMSPNNNNNNSNTTA--------SSNQASKSPSHHPLHPLY--HPLGSQQQQQQQQQHQQHP 380
            |.:.||...|:::.:.:|        :|||...|...|.::|::  |..|          |.|| 
Zfish     3 SMSFMSDTLNSSDPSKSAFLEFGHGLASNQQHLSGFAHNIYPVHGLHSGG----------HLQH- 56

  Fly   381 QQQQHPQQQQQQHPHQP---TTPTSSSSSGGGSSLTHHPHPHLTGSHGGYLLPSSSNESDEEGEE 442
               ..|......|..:|   ..|...|::..|:.:.:.|:     :|.|.|..:.:.:::.|...
Zfish    57 ---DAPYPSSAPHYSRPLGYAYPGPVSAAAPGAYMPYQPN-----NHSGALAHTRAEDTNHEKPA 113

  Fly   443 IIEEDDGTDGPSDSSSPHGD----GNSKRKKKTRTVFSRAQVFQLESTFDLKRYLSSSERAGLAA 503
            :||              :|:    |..|:.:|.||::|..|:..|...|...:||:..|||.|||
Zfish   114 VIE--------------NGEIRLNGKGKKIRKPRTIYSSVQLQALHQRFQQTQYLALPERADLAA 164

  Fly   504 SLRLTETQVKIWFQNRRNKWKRQLAAELEAANMANMAHAAQRLVRVPVLYHDGTTAGFVPPPPPH 568
            .|.||:|||||||||:|:|:|:                         ::.| |::.         
Zfish   165 KLGLTQTQVKIWFQNKRSKYKK-------------------------IMKH-GSSG--------- 194

  Fly   569 HHPMQYYAAARNTSPPRPPLSSLVXGVGCLATAPMSLLKPPNSMAH--PPHPQPPPPAPLHM 628
              |........::||..|.||.|..........||......|:..|  |||.|.|.|.|..|
Zfish   195 --PEGELLHTSSSSPCSPGLSQLWEVSMANKVPPMHPSSYMNNYGHWYPPHHQDPVPRPQMM 254

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HmxNP_001262674.1 Homeobox 471..524 CDD:278475 28/52 (54%)
dlx4bNP_571393.1 Homeobox 132..185 CDD:278475 28/52 (54%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D574097at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.920

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