DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hmx and dlx4b

DIOPT Version :10

Sequence 1:NP_001262674.1 Gene:Hmx / 42110 FlyBaseID:FBgn0264005 Length:718 Species:Drosophila melanogaster
Sequence 2:NP_571393.1 Gene:dlx4b / 30581 ZFINID:ZDB-GENE-990415-50 Length:254 Species:Danio rerio


Alignment Length:322 Identity:83/322 - (25%)
Similarity:129/322 - (40%) Gaps:89/322 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   326 SPTSMSPNNNNNNSNTTA--------SSNQASKSPSHHPLHPLY--HPLGSQQQQQQQQQHQQHP 380
            |.:.||...|:::.:.:|        :|||...|...|.::|::  |..|          |.|| 
Zfish     3 SMSFMSDTLNSSDPSKSAFLEFGHGLASNQQHLSGFAHNIYPVHGLHSGG----------HLQH- 56

  Fly   381 QQQQHPQQQQQQHPHQP---TTPTSSSSSGGGSSLTHHPHPHLTGSHGGYLLPSSSNESDEEGEE 442
               ..|......|..:|   ..|...|::..|:.:.:.|:     :|.|.|..:.:.:::.|...
Zfish    57 ---DAPYPSSAPHYSRPLGYAYPGPVSAAAPGAYMPYQPN-----NHSGALAHTRAEDTNHEKPA 113

  Fly   443 IIEEDDGTDGPSDSSSPHGD----GNSKRKKKTRTVFSRAQVFQLESTFDLKRYLSSSERAGLAA 503
            :||              :|:    |..|:.:|.||::|..|:..|...|...:||:..|||.|||
Zfish   114 VIE--------------NGEIRLNGKGKKIRKPRTIYSSVQLQALHQRFQQTQYLALPERADLAA 164

  Fly   504 SLRLTETQVKIWFQNRRNKWKRQLAAELEAANMANMAHAAQRLVRVPVLYHDGTTAGFVPPPPPH 568
            .|.||:|||||||||:|:|:|:                         ::.| |::.         
Zfish   165 KLGLTQTQVKIWFQNKRSKYKK-------------------------IMKH-GSSG--------- 194

  Fly   569 HHPMQYYAAARNTSPPRPPLSSLVXGVGCLATAPMSLLKPPNSMAH--PPHPQPPPPAPLHM 628
              |........::||..|.||.|..........||......|:..|  |||.|.|.|.|..|
Zfish   195 --PEGELLHTSSSSPCSPGLSQLWEVSMANKVPPMHPSSYMNNYGHWYPPHHQDPVPRPQMM 254

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HmxNP_001262674.1 Homeodomain 469..525 CDD:459649 29/55 (53%)
dlx4bNP_571393.1 Homeodomain 130..186 CDD:459649 29/55 (53%)

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