DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hmx and dbx1a

DIOPT Version :10

Sequence 1:NP_001262674.1 Gene:Hmx / 42110 FlyBaseID:FBgn0264005 Length:718 Species:Drosophila melanogaster
Sequence 2:NP_571233.1 Gene:dbx1a / 30394 ZFINID:ZDB-GENE-000128-8 Length:314 Species:Danio rerio


Alignment Length:310 Identity:75/310 - (24%)
Similarity:103/310 - (33%) Gaps:120/310 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly   251 AAGLITPIPQLPQPGAGGPQDAAMLSR-LGFISQWGALAGRYAALCPPGWPWAPQRLPFHSPTH- 313
            ||.|.:|.|..|   :...:|...::| .||:||        .|..|...|  |...|...|.: 
Zfish    20 AASLHSPFPAHP---SFLVEDLLRINRPSGFLSQ--------TAHSPCASP--PNSTPLSIPDNC 71

  Fly   314 ---DSSSTNTTE-----NPPSPTS--------------MSPNNNNNNSNTTASSNQASKSPSHHP 356
               |..|...||     :|.:|.|              ::|           |..:|:..||.|.
Zfish    72 RILDRVSPGITEKHGPCSPKTPVSSKDPTYLKFGVSAILAP-----------SPKKATSPPSVHS 125

  Fly   357 LHPLYHPLGSQQQQQQQQQHQQHPQQQQHPQQQQQQHPHQPTTPTSSSSSGGGSSLTHHPHPHLT 421
            :||                                                .|.|:     |:..
Zfish   126 IHP------------------------------------------------KGFSV-----PYFD 137

  Fly   422 GSHGGYL----LPSSSNESDEEGEEIIEEDDGTDGPSDSSSP-HGDGNSKRKKKTRTVFSRAQVF 481
            ||...::    .|:.|:.              ...|...|.| ...|..:|....|.|||..|..
Zfish   138 GSFCPFVRSSYFPAPSSV--------------VPIPGTFSWPLAARGKPRRGMLRRAVFSDVQRK 188

  Fly   482 QLESTFDLKRYLSSSERAGLAASLRLTETQVKIWFQNRRNKWKRQLAAEL 531
            .||..|..::|:|..:|..|||.|.|.::||||||||||.||:.....||
Zfish   189 ALEKMFQKQKYISKPDRKKLAAKLGLKDSQVKIWFQNRRMKWRNSKEREL 238

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HmxNP_001262674.1 Homeodomain 469..525 CDD:459649 28/55 (51%)
dbx1aNP_571233.1 Homeodomain 178..232 CDD:459649 28/53 (53%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 234..279 2/5 (40%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 292..314
Blue background indicates that the domain is not in the aligned region.

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