Protein Alignment Hmx and Hoxd4

DIOPT Version :10

• Sequence 1: NP_001262674.1
• Gene: Hmx / 42110
• FlyBaseID: FBgn0264005
• Length: 718
• Species: Drosophila melanogaster
• Sequence 2: NP_001099355.1
• Gene: Hoxd4 / 288153
• RGDID: 1309690
• Length: 251
• Species: Rattus norvegicus
• Alignment Length: 153
• Identity: 47/153 - (30%)
• Similarity: 65/153 - (42%)
• Gaps: 31/153 - (20%)

  Fly   400 PTSSSSSGGGSSLT---HHPHPHLTGSHGGYLLPS----SSNESDEEGEEIIEEDDGTDGPS--- 454
            |......|.||:|.   |...|...|||  |..|.    :...:...|.....:..|...|.
  Rat    61 PFGGGGPGPGSALPARGHGQEPSGPGSH--YSAPGEPCPAPPPAPLPGARACSQPTGPKQPPPGT 123

  Fly   455 -----------------DSSSPHGDGNSKRKKKTRTVFSRAQVFQLESTFDLKRYLSSSERAGLA 502
                             :|.:|:..|.  ..|::||.::|.||.:||..|...|||:...|..:|
  Rat   124 ALKQPAVVYPWMKKVHVNSVNPNYTGG--EPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIA 186

  Fly   503 ASLRLTETQVKIWFQNRRNKWKR 525
            .:|.|:|.|:||||||||.|||:
  Rat   187 HTLCLSERQIKIWFQNRRMKWKK 209

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Hmx	NP_001262674.1	Homeodomain	469..525	CDD:459649	28/55 (51%)
Hoxd4	NP_001099355.1	Homeodomain	153..209	CDD:459649	28/55 (51%)